Protein–RNA interactions for Protein: Q8IV31

TMEM139, Transmembrane protein 139, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139Q8IV31 SAA2-206ENST00000530400 323 ntTSL 3 BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 PCDHGB8P-202ENST00000507007 2873 ntBASIC14.62□□□□□ -0.07
TMEM139Q8IV31 AC022497.1-201ENST00000624916 3691 ntBASIC14.62□□□□□ -0.07
TMEM139Q8IV31 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 TNKS-213ENST00000522110 2900 ntBASIC14.62□□□□□ -0.07
TMEM139Q8IV31 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM139Q8IV31 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 MIR645-201ENST00000385283 94 ntBASIC14.61□□□□□ -0.07
TMEM139Q8IV31 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 RPL3P2-204ENST00000413027 1203 ntBASIC14.61□□□□□ -0.07
TMEM139Q8IV31 RN7SL788P-201ENST00000460504 316 ntBASIC14.61□□□□□ -0.07
TMEM139Q8IV31 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 AC095040.1-201ENST00000513286 675 ntBASIC14.61□□□□□ -0.07
TMEM139Q8IV31 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 AC009542.2-202ENST00000619004 1067 ntBASIC14.61□□□□□ -0.07
TMEM139Q8IV31 AL136295.7-201ENST00000619226 1200 ntBASIC14.61□□□□□ -0.07
TMEM139Q8IV31 AL033527.4-201ENST00000641026 673 ntBASIC14.61□□□□□ -0.07
TMEM139Q8IV31 DDC-206ENST00000431062 1620 ntTSL 5 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 PPP4R3A-206ENST00000554943 3369 ntTSL 5 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM139Q8IV31 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 CICP19-201ENST00000632944 2357 ntBASIC14.6□□□□□ -0.07
TMEM139Q8IV31 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 AC079776.1-201ENST00000401540 1152 ntBASIC14.6□□□□□ -0.07
TMEM139Q8IV31 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM139Q8IV31 MIR1909-201ENST00000411312 80 ntBASIC14.6□□□□□ -0.07
TMEM139Q8IV31 HNRNPA1P33-201ENST00000421426 561 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms