Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 GSTM2P1-201ENST00000405166 654 ntBASIC12.48□□□□□ -0.41
CACNA1BQ00975 LAMTOR4-207ENST00000474141 519 ntTSL 2 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 PSME1-210ENST00000561435 945 ntTSL 2 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 AC008738.4-201ENST00000590492 700 ntTSL 3 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 SARS2-211ENST00000598831 665 ntTSL 5 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 AL133517.1-201ENST00000413412 748 ntBASIC12.47□□□□□ -0.41
CACNA1BQ00975 AL450304.1-201ENST00000418657 759 ntBASIC12.47□□□□□ -0.41
CACNA1BQ00975 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 AC020917.1-201ENST00000494084 893 ntBASIC12.47□□□□□ -0.41
CACNA1BQ00975 RAD52-212ENST00000541619 560 ntTSL 4 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 HP-215ENST00000569639 568 ntTSL 4 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 TCF4-AS1-201ENST00000587660 396 ntTSL 2 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 DLG2-AS1_2.1-201ENST00000614607 218 ntBASIC12.47□□□□□ -0.41
CACNA1BQ00975 AL137785.1-201ENST00000637466 490 ntTSL 5 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 AC073585.1-201ENST00000368895 1328 ntBASIC12.47□□□□□ -0.41
CACNA1BQ00975 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 LINC02228-204ENST00000642115 2962 ntBASIC12.47□□□□□ -0.41
CACNA1BQ00975 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
CACNA1BQ00975 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CACNA1BQ00975 RN7SKP245-201ENST00000364025 320 ntBASIC12.46□□□□□ -0.41
CACNA1BQ00975 PRSS3-203ENST00000379405 834 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CACNA1BQ00975 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC12.46□□□□□ -0.41
CACNA1BQ00975 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC12.46□□□□□ -0.41
CACNA1BQ00975 PTDSS1-206ENST00000522072 1112 ntTSL 2 BASIC12.46□□□□□ -0.41
CACNA1BQ00975 SSPN-207ENST00000540266 587 ntTSL 4 BASIC12.46□□□□□ -0.41
CACNA1BQ00975 AP002383.2-201ENST00000545768 675 ntBASIC12.46□□□□□ -0.41
CACNA1BQ00975 AC005154.1-223ENST00000584372 547 ntTSL 5 BASIC12.46□□□□□ -0.41
CACNA1BQ00975 AL355353.1-201ENST00000604014 330 ntBASIC12.46□□□□□ -0.41
CACNA1BQ00975 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC12.46□□□□□ -0.41
CACNA1BQ00975 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC12.46□□□□□ -0.41
CACNA1BQ00975 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
CACNA1BQ00975 HLA-DOB-206ENST00000438763 1372 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CACNA1BQ00975 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.41
CACNA1BQ00975 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CACNA1BQ00975 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CACNA1BQ00975 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.46□□□□□ -0.41
CACNA1BQ00975 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.46□□□□□ -0.41
CACNA1BQ00975 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CACNA1BQ00975 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CACNA1BQ00975 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CACNA1BQ00975 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CACNA1BQ00975 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CACNA1BQ00975 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.46□□□□□ -0.41
CACNA1BQ00975 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CACNA1BQ00975 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CACNA1BQ00975 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms