Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC12.21□□□□□ -0.45
GFRA1P56159 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GFRA1P56159 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC12.21□□□□□ -0.45
GFRA1P56159 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC12.21□□□□□ -0.45
GFRA1P56159 REEP5-205ENST00000504247 480 ntTSL 5 BASIC12.21□□□□□ -0.45
GFRA1P56159 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC12.21□□□□□ -0.45
GFRA1P56159 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC12.21□□□□□ -0.45
GFRA1P56159 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC12.21□□□□□ -0.45
GFRA1P56159 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC12.21□□□□□ -0.45
GFRA1P56159 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC12.21□□□□□ -0.45
GFRA1P56159 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC12.21□□□□□ -0.45
GFRA1P56159 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC12.21□□□□□ -0.45
GFRA1P56159 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
GFRA1P56159 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
GFRA1P56159 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GFRA1P56159 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.21□□□□□ -0.45
GFRA1P56159 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
GFRA1P56159 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
GFRA1P56159 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
GFRA1P56159 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.21□□□□□ -0.46
GFRA1P56159 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.21□□□□□ -0.46
GFRA1P56159 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
GFRA1P56159 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
GFRA1P56159 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
GFRA1P56159 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
GFRA1P56159 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
GFRA1P56159 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
GFRA1P56159 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
GFRA1P56159 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
GFRA1P56159 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.2□□□□□ -0.46
GFRA1P56159 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
GFRA1P56159 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 AL359183.1-201ENST00000623796 2132 ntBASIC12.2□□□□□ -0.46
GFRA1P56159 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
GFRA1P56159 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 AL109809.1-201ENST00000418979 1367 ntBASIC12.2□□□□□ -0.46
GFRA1P56159 AC138969.2-201ENST00000532739 9932 ntBASIC12.2□□□□□ -0.46
GFRA1P56159 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.2□□□□□ -0.46
GFRA1P56159 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
GFRA1P56159 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
GFRA1P56159 AC012531.1-201ENST00000562848 2680 ntBASIC12.2□□□□□ -0.46
GFRA1P56159 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
GFRA1P56159 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
GFRA1P56159 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
GFRA1P56159 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
GFRA1P56159 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.2□□□□□ -0.46
GFRA1P56159 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 AC114501.1-201ENST00000445949 172 ntBASIC12.2□□□□□ -0.46
GFRA1P56159 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 PARP8-206ENST00000503665 572 ntTSL 4 BASIC12.2□□□□□ -0.46
GFRA1P56159 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 F11R-204ENST00000537746 1245 ntTSL 2 BASIC12.2□□□□□ -0.46
GFRA1P56159 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC12.2□□□□□ -0.46
GFRA1P56159 METTL7AP1-201ENST00000547343 496 ntBASIC12.2□□□□□ -0.46
GFRA1P56159 HNRNPA1P5-201ENST00000558213 966 ntBASIC12.2□□□□□ -0.46
GFRA1P56159 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC12.2□□□□□ -0.46
GFRA1P56159 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC12.2□□□□□ -0.46
GFRA1P56159 AC005274.1-201ENST00000623460 802 ntBASIC12.2□□□□□ -0.46
GFRA1P56159 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
GFRA1P56159 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.2□□□□□ -0.46
GFRA1P56159 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GFRA1P56159 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
GFRA1P56159 MSNP1-201ENST00000511640 1732 ntBASIC12.2□□□□□ -0.46
GFRA1P56159 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GFRA1P56159 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.19□□□□□ -0.46
GFRA1P56159 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms