Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MYCNP04198 AC132192.2-201ENST00000596206 1147 ntBASIC16.69■□□□□ 0.26
MYCNP04198 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC16.69■□□□□ 0.26
MYCNP04198 AC105129.3-201ENST00000605455 485 ntBASIC16.69■□□□□ 0.26
MYCNP04198 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.69■□□□□ 0.26
MYCNP04198 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MYCNP04198 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.69■□□□□ 0.26
MYCNP04198 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.69■□□□□ 0.26
MYCNP04198 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.69■□□□□ 0.26
MYCNP04198 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.69■□□□□ 0.26
MYCNP04198 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.69■□□□□ 0.26
MYCNP04198 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MYCNP04198 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.69■□□□□ 0.26
MYCNP04198 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MYCNP04198 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
MYCNP04198 AC006058.4-201ENST00000624016 1670 ntBASIC16.69■□□□□ 0.26
MYCNP04198 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.69■□□□□ 0.26
MYCNP04198 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MYCNP04198 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MYCNP04198 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 AC019072.1-201ENST00000604535 1551 ntBASIC16.68■□□□□ 0.26
MYCNP04198 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 CAMK2D-213ENST00000514328 1497 ntTSL 5 BASIC16.68■□□□□ 0.26
MYCNP04198 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.68■□□□□ 0.26
MYCNP04198 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
MYCNP04198 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
MYCNP04198 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 OR7A2P-201ENST00000304105 930 ntBASIC16.68■□□□□ 0.26
MYCNP04198 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 AC010141.1-201ENST00000411585 623 ntBASIC16.68■□□□□ 0.26
MYCNP04198 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.68■□□□□ 0.26
MYCNP04198 TP53-203ENST00000413465 1018 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC16.68■□□□□ 0.26
MYCNP04198 SEPT2P1-201ENST00000419651 180 ntBASIC16.68■□□□□ 0.26
MYCNP04198 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC16.68■□□□□ 0.26
MYCNP04198 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 AL353572.1-201ENST00000442490 417 ntBASIC16.68■□□□□ 0.26
MYCNP04198 EIF2S2P2-201ENST00000447161 982 ntBASIC16.68■□□□□ 0.26
MYCNP04198 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC16.68■□□□□ 0.26
MYCNP04198 NAA50-206ENST00000493454 964 ntTSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC16.68■□□□□ 0.26
MYCNP04198 AC104066.1-201ENST00000512377 751 ntBASIC16.68■□□□□ 0.26
MYCNP04198 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.68■□□□□ 0.26
MYCNP04198 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC16.68■□□□□ 0.26
MYCNP04198 AC107982.3-201ENST00000584957 985 ntBASIC16.68■□□□□ 0.26
MYCNP04198 AC109347.2-201ENST00000610220 349 ntBASIC16.68■□□□□ 0.26
MYCNP04198 OR4C3-202ENST00000611380 597 ntBASIC16.68■□□□□ 0.26
MYCNP04198 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
MYCNP04198 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 AC011700.1-201ENST00000610409 2627 ntBASIC16.68■□□□□ 0.26
MYCNP04198 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 AC026748.1-201ENST00000624349 3251 ntBASIC16.68■□□□□ 0.26
MYCNP04198 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
MYCNP04198 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.68■□□□□ 0.26
MYCNP04198 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 ZNF160-201ENST00000355147 1304 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MYCNP04198 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MYCNP04198 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.67■□□□□ 0.26
MYCNP04198 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MYCNP04198 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MYCNP04198 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MYCNP04198 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MYCNP04198 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MYCNP04198 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MYCNP04198 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC16.67■□□□□ 0.26
MYCNP04198 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
MYCNP04198 MALAT1-201ENST00000508832 1519 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms