Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 FLJ30679-201ENST00000624773 1980 ntBASIC11.17□□□□□ -0.62
RAB40CQ96S21 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 KRT18P36-201ENST00000411618 1276 ntBASIC11.17□□□□□ -0.62
RAB40CQ96S21 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 HIST2H2BB-201ENST00000449108 381 ntBASIC11.17□□□□□ -0.62
RAB40CQ96S21 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 AC078819.1-201ENST00000547454 765 ntBASIC11.17□□□□□ -0.62
RAB40CQ96S21 AC012085.1-201ENST00000548270 765 ntBASIC11.17□□□□□ -0.62
RAB40CQ96S21 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 AC005225.4-201ENST00000557330 545 ntBASIC11.17□□□□□ -0.62
RAB40CQ96S21 C2orf69P2-201ENST00000562032 1123 ntBASIC11.17□□□□□ -0.62
RAB40CQ96S21 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 AC008735.3-201ENST00000596646 500 ntBASIC11.17□□□□□ -0.62
RAB40CQ96S21 AC233724.13-201ENST00000598383 410 ntBASIC11.17□□□□□ -0.62
RAB40CQ96S21 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 AC091271.1-201ENST00000611877 1162 ntBASIC11.17□□□□□ -0.62
RAB40CQ96S21 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 IGHV3-72-202ENST00000621503 303 ntBASIC11.17□□□□□ -0.62
RAB40CQ96S21 RPL35-206ENST00000629845 340 ntTSL 5 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 AC008764.8-201ENST00000623966 2717 ntBASIC11.17□□□□□ -0.62
RAB40CQ96S21 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
RAB40CQ96S21 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB40CQ96S21 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 NBN-203ENST00000409330 4523 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 KCTD21-AS1-207ENST00000600795 1549 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms