Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.03□□□□□ -0.32
CLK1P49759 AC090164.2-201ENST00000611487 516 ntBASIC13.03□□□□□ -0.32
CLK1P49759 AL008638.5-201ENST00000623814 1298 ntBASIC13.03□□□□□ -0.32
CLK1P49759 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.03□□□□□ -0.32
CLK1P49759 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC13.03□□□□□ -0.32
CLK1P49759 AC026271.4-201ENST00000578214 1833 ntBASIC13.03□□□□□ -0.32
CLK1P49759 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.03□□□□□ -0.32
CLK1P49759 GHET1-201ENST00000627071 1906 ntBASIC13.03□□□□□ -0.32
CLK1P49759 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.03□□□□□ -0.32
CLK1P49759 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC13.02□□□□□ -0.32
CLK1P49759 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CLK1P49759 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CLK1P49759 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLK1P49759 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CLK1P49759 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CLK1P49759 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.02□□□□□ -0.32
CLK1P49759 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLK1P49759 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.02□□□□□ -0.32
CLK1P49759 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.02□□□□□ -0.33
CLK1P49759 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CLK1P49759 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CLK1P49759 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.02□□□□□ -0.33
CLK1P49759 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 MIR1908-201ENST00000410394 80 ntBASIC13.02□□□□□ -0.33
CLK1P49759 KRT18P36-201ENST00000411618 1276 ntBASIC13.02□□□□□ -0.33
CLK1P49759 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.02□□□□□ -0.33
CLK1P49759 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
CLK1P49759 AC078875.1-201ENST00000431907 724 ntBASIC13.02□□□□□ -0.33
CLK1P49759 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.02□□□□□ -0.33
CLK1P49759 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.02□□□□□ -0.33
CLK1P49759 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
CLK1P49759 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.02□□□□□ -0.33
CLK1P49759 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.02□□□□□ -0.33
CLK1P49759 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.02□□□□□ -0.33
CLK1P49759 SNORD3B-2-202ENST00000571722 791 ntBASIC13.02□□□□□ -0.33
CLK1P49759 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.02□□□□□ -0.33
CLK1P49759 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.02□□□□□ -0.33
CLK1P49759 AL022328.3-201ENST00000607943 679 ntBASIC13.02□□□□□ -0.33
CLK1P49759 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.02□□□□□ -0.33
CLK1P49759 AC004623.1-201ENST00000624592 2127 ntBASIC13.02□□□□□ -0.33
CLK1P49759 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.02□□□□□ -0.33
CLK1P49759 AGGF1P10-201ENST00000635005 2191 ntBASIC13.02□□□□□ -0.33
CLK1P49759 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.02□□□□□ -0.33
CLK1P49759 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.02□□□□□ -0.33
CLK1P49759 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
CLK1P49759 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC13.02□□□□□ -0.33
CLK1P49759 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC13.02□□□□□ -0.33
CLK1P49759 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.02□□□□□ -0.33
CLK1P49759 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC13.02□□□□□ -0.33
CLK1P49759 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.02□□□□□ -0.33
CLK1P49759 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 AL845472.1-202ENST00000624675 4080 ntBASIC13.02□□□□□ -0.33
CLK1P49759 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.02□□□□□ -0.33
CLK1P49759 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLK1P49759 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CLK1P49759 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 AP001972.5-201ENST00000624624 2338 ntBASIC13.01□□□□□ -0.33
CLK1P49759 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CLK1P49759 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.01□□□□□ -0.33
CLK1P49759 AL021155.1-201ENST00000438808 2637 ntBASIC13.01□□□□□ -0.33
CLK1P49759 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC13.01□□□□□ -0.33
CLK1P49759 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC13.01□□□□□ -0.33
CLK1P49759 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CLK1P49759 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.01□□□□□ -0.33
CLK1P49759 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.01□□□□□ -0.33
CLK1P49759 AC244107.1-201ENST00000442033 332 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms