Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.18□□□□□ -0.46
CTLA4P16410 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
CTLA4P16410 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.18□□□□□ -0.46
CTLA4P16410 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.18□□□□□ -0.46
CTLA4P16410 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.18□□□□□ -0.46
CTLA4P16410 HNRNPLP1-201ENST00000421896 1501 ntBASIC12.18□□□□□ -0.46
CTLA4P16410 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CTLA4P16410 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CTLA4P16410 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.18□□□□□ -0.46
CTLA4P16410 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.18□□□□□ -0.46
CTLA4P16410 RPL8P2-201ENST00000430538 502 ntBASIC12.18□□□□□ -0.46
CTLA4P16410 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.18□□□□□ -0.46
CTLA4P16410 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.18□□□□□ -0.46
CTLA4P16410 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.18□□□□□ -0.46
CTLA4P16410 AC005077.3-201ENST00000449614 213 ntBASIC12.18□□□□□ -0.46
CTLA4P16410 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.18□□□□□ -0.46
CTLA4P16410 RN7SL67P-201ENST00000492147 296 ntBASIC12.18□□□□□ -0.46
CTLA4P16410 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.18□□□□□ -0.46
CTLA4P16410 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.18□□□□□ -0.46
CTLA4P16410 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
CTLA4P16410 ACTG1P17-201ENST00000558391 1119 ntBASIC12.18□□□□□ -0.46
CTLA4P16410 AC242376.1-201ENST00000559033 726 ntBASIC12.18□□□□□ -0.46
CTLA4P16410 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.18□□□□□ -0.46
CTLA4P16410 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.18□□□□□ -0.46
CTLA4P16410 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
CTLA4P16410 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.18□□□□□ -0.46
CTLA4P16410 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.18□□□□□ -0.46
CTLA4P16410 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CTLA4P16410 CAP2P1-201ENST00000557743 1390 ntBASIC12.18□□□□□ -0.46
CTLA4P16410 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.18□□□□□ -0.46
CTLA4P16410 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CTLA4P16410 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 AC019109.1-201ENST00000401725 1874 ntBASIC12.17□□□□□ -0.46
CTLA4P16410 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
CTLA4P16410 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.17□□□□□ -0.46
CTLA4P16410 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.17□□□□□ -0.46
CTLA4P16410 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CTLA4P16410 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CTLA4P16410 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.17□□□□□ -0.46
CTLA4P16410 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.17□□□□□ -0.46
CTLA4P16410 AC005077.2-201ENST00000449786 690 ntBASIC12.17□□□□□ -0.46
CTLA4P16410 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.17□□□□□ -0.46
CTLA4P16410 FTH1P22-201ENST00000456305 520 ntBASIC12.17□□□□□ -0.46
CTLA4P16410 SCARNA12-201ENST00000459155 270 ntBASIC12.17□□□□□ -0.46
CTLA4P16410 NUP210P1-202ENST00000504322 710 ntBASIC12.17□□□□□ -0.46
CTLA4P16410 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.17□□□□□ -0.46
CTLA4P16410 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 RTN3P1-201ENST00000536295 711 ntBASIC12.17□□□□□ -0.46
CTLA4P16410 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.17□□□□□ -0.46
CTLA4P16410 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.17□□□□□ -0.46
CTLA4P16410 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.17□□□□□ -0.46
CTLA4P16410 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.17□□□□□ -0.46
CTLA4P16410 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.17□□□□□ -0.46
CTLA4P16410 SIGLEC18P-201ENST00000602271 909 ntBASIC12.17□□□□□ -0.46
CTLA4P16410 AP001505.2-201ENST00000616815 443 ntBASIC12.17□□□□□ -0.46
CTLA4P16410 AC009560.1-201ENST00000620208 434 ntBASIC12.17□□□□□ -0.46
CTLA4P16410 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.17□□□□□ -0.46
CTLA4P16410 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms