Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APPP05067 NCLP1-201ENST00000445357 1963 ntBASIC16.53■□□□□ 0.24
APPP05067 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APPP05067 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APPP05067 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.53■□□□□ 0.24
APPP05067 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APPP05067 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
APPP05067 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
APPP05067 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.53■□□□□ 0.24
APPP05067 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APPP05067 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
APPP05067 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APPP05067 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
APPP05067 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APPP05067 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
APPP05067 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
APPP05067 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
APPP05067 SNORA50C-201ENST00000408535 133 ntBASIC16.53■□□□□ 0.24
APPP05067 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
APPP05067 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC16.53■□□□□ 0.24
APPP05067 AC004837.1-201ENST00000446267 564 ntBASIC16.53■□□□□ 0.24
APPP05067 MPRIPP1-201ENST00000452433 1089 ntBASIC16.53■□□□□ 0.24
APPP05067 RN7SL8P-201ENST00000461771 266 ntBASIC16.53■□□□□ 0.24
APPP05067 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.53■□□□□ 0.24
APPP05067 AC008267.1-201ENST00000474858 1069 ntBASIC16.53■□□□□ 0.24
APPP05067 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.53■□□□□ 0.24
APPP05067 EEF1GP8-201ENST00000506566 1154 ntBASIC16.53■□□□□ 0.24
APPP05067 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.53■□□□□ 0.24
APPP05067 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC16.53■□□□□ 0.24
APPP05067 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.53■□□□□ 0.24
APPP05067 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.53■□□□□ 0.24
APPP05067 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
APPP05067 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
APPP05067 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
APPP05067 SNORA50.1-201ENST00000628590 135 ntBASIC16.53■□□□□ 0.24
APPP05067 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
APPP05067 AL356585.2-201ENST00000625078 2396 ntBASIC16.53■□□□□ 0.24
APPP05067 Z82170.1-201ENST00000625081 3192 ntBASIC16.53■□□□□ 0.24
APPP05067 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
APPP05067 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APPP05067 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
APPP05067 RCC2P5-201ENST00000492126 1487 ntBASIC16.53■□□□□ 0.24
APPP05067 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
APPP05067 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.53■□□□□ 0.24
APPP05067 AC020917.4-201ENST00000623994 1999 ntBASIC16.53■□□□□ 0.24
APPP05067 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APPP05067 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APPP05067 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
APPP05067 IL9RP3-201ENST00000442856 1674 ntBASIC16.53■□□□□ 0.24
APPP05067 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.53■□□□□ 0.24
APPP05067 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
APPP05067 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
APPP05067 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.52■□□□□ 0.24
APPP05067 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.52■□□□□ 0.24
APPP05067 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
APPP05067 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 AC106827.1-201ENST00000366454 431 ntBASIC16.52■□□□□ 0.24
APPP05067 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.52■□□□□ 0.24
APPP05067 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.52■□□□□ 0.24
APPP05067 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
APPP05067 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.52■□□□□ 0.24
APPP05067 AC018463.1-201ENST00000456674 917 ntBASIC16.52■□□□□ 0.24
APPP05067 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.52■□□□□ 0.24
APPP05067 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.52■□□□□ 0.24
APPP05067 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.52■□□□□ 0.24
APPP05067 MIR3940-201ENST00000579148 102 ntBASIC16.52■□□□□ 0.24
APPP05067 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.52■□□□□ 0.24
APPP05067 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.52■□□□□ 0.24
APPP05067 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
APPP05067 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
APPP05067 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
APPP05067 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
APPP05067 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
APPP05067 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
APPP05067 AGAP12P-201ENST00000585227 2359 ntBASIC16.52■□□□□ 0.23
APPP05067 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.52■□□□□ 0.23
APPP05067 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
APPP05067 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC16.52■□□□□ 0.23
APPP05067 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
APPP05067 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
APPP05067 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
APPP05067 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
APPP05067 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
APPP05067 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
APPP05067 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APPP05067 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms