Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AL512430.1-201ENST00000392575 860 ntBASIC10.86□□□□□ -0.67
TRGV3P03979 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC10.86□□□□□ -0.67
TRGV3P03979 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC10.86□□□□□ -0.67
TRGV3P03979 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC10.86□□□□□ -0.67
TRGV3P03979 MAGEA5-201ENST00000446757 942 ntBASIC10.86□□□□□ -0.67
TRGV3P03979 AC018638.5-201ENST00000450885 754 ntBASIC10.86□□□□□ -0.67
TRGV3P03979 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 CD81-209ENST00000492627 886 ntTSL 3 BASIC10.86□□□□□ -0.67
TRGV3P03979 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 POLD4-208ENST00000532830 904 ntTSL 3 BASIC10.86□□□□□ -0.67
TRGV3P03979 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC10.86□□□□□ -0.67
TRGV3P03979 HERC2P11-201ENST00000562845 725 ntBASIC10.86□□□□□ -0.67
TRGV3P03979 AC100756.2-201ENST00000569537 736 ntBASIC10.86□□□□□ -0.67
TRGV3P03979 GAS7-216ENST00000583882 553 ntTSL 5 BASIC10.86□□□□□ -0.67
TRGV3P03979 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
TRGV3P03979 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC10.86□□□□□ -0.67
TRGV3P03979 AC005632.3-201ENST00000605544 308 ntBASIC10.86□□□□□ -0.67
TRGV3P03979 AC106872.11-201ENST00000605838 421 ntBASIC10.86□□□□□ -0.67
TRGV3P03979 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC10.86□□□□□ -0.67
TRGV3P03979 AC084346.2-201ENST00000607097 949 ntBASIC10.86□□□□□ -0.67
TRGV3P03979 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC10.86□□□□□ -0.67
TRGV3P03979 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC10.86□□□□□ -0.67
TRGV3P03979 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC10.86□□□□□ -0.67
TRGV3P03979 AL161773.1-201ENST00000624845 863 ntBASIC10.86□□□□□ -0.67
TRGV3P03979 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC10.86□□□□□ -0.67
TRGV3P03979 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 AL358781.1-202ENST00000321081 1360 ntBASIC10.86□□□□□ -0.67
TRGV3P03979 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
TRGV3P03979 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 KRT8P19-201ENST00000551916 1455 ntBASIC10.86□□□□□ -0.67
TRGV3P03979 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
TRGV3P03979 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV3P03979 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV3P03979 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV3P03979 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV3P03979 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 NUTM2HP-201ENST00000442076 2498 ntBASIC10.85□□□□□ -0.67
TRGV3P03979 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
TRGV3P03979 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV3P03979 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC10.85□□□□□ -0.67
TRGV3P03979 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
TRGV3P03979 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV3P03979 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
TRGV3P03979 DDC-204ENST00000426377 1700 ntTSL 3 BASIC10.85□□□□□ -0.67
TRGV3P03979 PES1P2-201ENST00000449745 1735 ntBASIC10.85□□□□□ -0.67
TRGV3P03979 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV3P03979 CR383656.2-201ENST00000548656 2254 ntBASIC10.85□□□□□ -0.67
TRGV3P03979 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 SNORA50C-201ENST00000408535 133 ntBASIC10.85□□□□□ -0.67
TRGV3P03979 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV3P03979 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC10.85□□□□□ -0.67
TRGV3P03979 AC092573.1-201ENST00000433054 884 ntBASIC10.85□□□□□ -0.67
TRGV3P03979 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV3P03979 AC007279.1-201ENST00000448547 837 ntBASIC10.85□□□□□ -0.67
TRGV3P03979 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
TRGV3P03979 RN7SL767P-201ENST00000493013 295 ntBASIC10.85□□□□□ -0.67
TRGV3P03979 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC10.85□□□□□ -0.67
TRGV3P03979 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
TRGV3P03979 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC10.85□□□□□ -0.67
TRGV3P03979 MT3-203ENST00000565838 421 ntTSL 3 BASIC10.85□□□□□ -0.67
TRGV3P03979 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC10.85□□□□□ -0.67
TRGV3P03979 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC10.85□□□□□ -0.67
TRGV3P03979 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV3P03979 AL356740.1-201ENST00000602192 1297 ntBASIC10.85□□□□□ -0.67
TRGV3P03979 AL359091.4-201ENST00000610052 409 ntBASIC10.85□□□□□ -0.67
TRGV3P03979 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms