Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
ZIC3O60481 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.28□□□□□ -0.44
ZIC3O60481 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
ZIC3O60481 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.28□□□□□ -0.44
ZIC3O60481 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ZIC3O60481 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ZIC3O60481 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZIC3O60481 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZIC3O60481 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZIC3O60481 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZIC3O60481 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.27□□□□□ -0.44
ZIC3O60481 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.27□□□□□ -0.44
ZIC3O60481 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ZIC3O60481 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.27□□□□□ -0.44
ZIC3O60481 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZIC3O60481 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ZIC3O60481 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
ZIC3O60481 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
ZIC3O60481 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC12.27□□□□□ -0.44
ZIC3O60481 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
ZIC3O60481 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 AL355102.3-201ENST00000554299 1678 ntBASIC12.27□□□□□ -0.45
ZIC3O60481 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
ZIC3O60481 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC12.27□□□□□ -0.45
ZIC3O60481 GCSHP3-201ENST00000431120 391 ntBASIC12.27□□□□□ -0.45
ZIC3O60481 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.27□□□□□ -0.45
ZIC3O60481 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC12.27□□□□□ -0.45
ZIC3O60481 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC12.27□□□□□ -0.45
ZIC3O60481 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
ZIC3O60481 RN7SL582P-201ENST00000491078 279 ntBASIC12.27□□□□□ -0.45
ZIC3O60481 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC12.27□□□□□ -0.45
ZIC3O60481 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC12.27□□□□□ -0.45
ZIC3O60481 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC12.27□□□□□ -0.45
ZIC3O60481 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 AC011247.3-201ENST00000603297 438 ntBASIC12.27□□□□□ -0.45
ZIC3O60481 AC008972.2-201ENST00000606587 494 ntBASIC12.27□□□□□ -0.45
ZIC3O60481 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
ZIC3O60481 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.27□□□□□ -0.45
ZIC3O60481 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC12.27□□□□□ -0.45
ZIC3O60481 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
ZIC3O60481 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC12.27□□□□□ -0.45
ZIC3O60481 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ZIC3O60481 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
ZIC3O60481 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.27□□□□□ -0.45
ZIC3O60481 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
ZIC3O60481 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZIC3O60481 GBAP1-208ENST00000566701 1546 ntBASIC12.27□□□□□ -0.45
ZIC3O60481 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC12.27□□□□□ -0.45
ZIC3O60481 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 AC005562.1-201ENST00000583030 3219 ntBASIC12.26□□□□□ -0.45
ZIC3O60481 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
ZIC3O60481 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.26□□□□□ -0.45
ZIC3O60481 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC12.26□□□□□ -0.45
ZIC3O60481 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.26□□□□□ -0.45
ZIC3O60481 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.26□□□□□ -0.45
ZIC3O60481 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.26□□□□□ -0.45
ZIC3O60481 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
ZIC3O60481 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.26□□□□□ -0.45
ZIC3O60481 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms