Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
O00370 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.64□□□□□ -0.07
O00370 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
O00370 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 AP000437.1-201ENST00000624057 2085 ntBASIC14.64□□□□□ -0.07
O00370 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC14.64□□□□□ -0.07
O00370 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.64□□□□□ -0.07
O00370 RN7SKP109-201ENST00000410592 316 ntBASIC14.64□□□□□ -0.07
O00370 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
O00370 AL132994.1-201ENST00000554098 400 ntBASIC14.64□□□□□ -0.07
O00370 AC079328.1-201ENST00000560358 952 ntBASIC14.64□□□□□ -0.07
O00370 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.64□□□□□ -0.07
O00370 AC007952.4-201ENST00000573866 637 ntBASIC14.64□□□□□ -0.07
O00370 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.64□□□□□ -0.07
O00370 AC016629.1-201ENST00000596579 586 ntBASIC14.64□□□□□ -0.07
O00370 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.64□□□□□ -0.07
O00370 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.64□□□□□ -0.07
O00370 AC087392.5-201ENST00000612517 489 ntBASIC14.64□□□□□ -0.07
O00370 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
O00370 AL353726.2-201ENST00000623259 884 ntBASIC14.64□□□□□ -0.07
O00370 AC128714.1-201ENST00000637035 887 ntBASIC14.64□□□□□ -0.07
O00370 AC068587.10-201ENST00000641210 219 ntBASIC14.64□□□□□ -0.07
O00370 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.64□□□□□ -0.07
O00370 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
O00370 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
O00370 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
O00370 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC14.64□□□□□ -0.07
O00370 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
O00370 DLX4-206ENST00000611342 1662 ntBASIC14.64□□□□□ -0.07
O00370 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.64□□□□□ -0.07
O00370 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.64□□□□□ -0.07
O00370 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
O00370 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
O00370 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
O00370 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.64□□□□□ -0.07
O00370 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
O00370 AL031595.1-201ENST00000623969 4709 ntBASIC14.63□□□□□ -0.07
O00370 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
O00370 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.63□□□□□ -0.07
O00370 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.63□□□□□ -0.07
O00370 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.63□□□□□ -0.07
O00370 NOC2LP1-201ENST00000450578 752 ntBASIC14.63□□□□□ -0.07
O00370 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
O00370 AC025186.1-201ENST00000478174 870 ntBASIC14.63□□□□□ -0.07
O00370 RNA5SP417-201ENST00000516459 108 ntBASIC14.63□□□□□ -0.07
O00370 IGHV1-12-201ENST00000518307 205 ntBASIC14.63□□□□□ -0.07
O00370 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
O00370 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.63□□□□□ -0.07
O00370 AL031713.1-201ENST00000564813 661 ntBASIC14.63□□□□□ -0.07
O00370 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.63□□□□□ -0.07
O00370 RPL17P45-201ENST00000586289 509 ntBASIC14.63□□□□□ -0.07
O00370 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
O00370 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.63□□□□□ -0.07
O00370 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.63□□□□□ -0.07
O00370 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
O00370 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.63□□□□□ -0.07
O00370 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 EGLN3-205ENST00000547327 2849 ntBASIC14.63□□□□□ -0.07
O00370 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
O00370 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
O00370 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
O00370 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
O00370 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC14.62□□□□□ -0.07
O00370 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms