Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 FAM90A12P-201ENST00000519497 2375 ntBASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 FAM90A24P-201ENST00000520792 2369 ntBASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 OR2W2P-201ENST00000406313 909 ntBASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 BCAS2P2-201ENST00000425064 674 ntBASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 AC008026.2-201ENST00000495438 348 ntBASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 AC093909.3-201ENST00000504783 336 ntBASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 PGAM1P12-201ENST00000505622 748 ntBASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 AC026410.1-201ENST00000507366 1101 ntBASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 AL139424.3-202ENST00000641619 917 ntBASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 AC104581.4-201ENST00000623126 3052 ntBASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 AC008620.2-201ENST00000510294 1569 ntBASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 AC024293.1-201ENST00000467930 498 ntBASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 RN7SL396P-201ENST00000471086 295 ntBASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 AC093300.1-201ENST00000510368 1201 ntBASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 COQ10BP2-201ENST00000513804 724 ntBASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 TRMT112P3-201ENST00000580149 358 ntBASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 AC073592.2-201ENST00000623062 780 ntBASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 MAPK10-262ENST00000641051 5738 ntBASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 331.8 ms