Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 AC139749.1-202ENST00000617529 3139 ntBASIC15.06■□□□□ 0
LOC285556D6RIA3 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC15.06■□□□□ 0
LOC285556D6RIA3 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC15.06■□□□□ 0
LOC285556D6RIA3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 MIR766-201ENST00000390223 111 ntBASIC15.06■□□□□ 0
LOC285556D6RIA3 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
LOC285556D6RIA3 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LOC285556D6RIA3 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC15.06■□□□□ 0
LOC285556D6RIA3 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC15.06■□□□□ 0
LOC285556D6RIA3 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC15.06■□□□□ 0
LOC285556D6RIA3 KRT16P4-202ENST00000580052 362 ntTSL 3 BASIC15.06■□□□□ 0
LOC285556D6RIA3 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC15.06■□□□□ 0
LOC285556D6RIA3 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC15.06■□□□□ 0
LOC285556D6RIA3 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC15.06■□□□□ 0
LOC285556D6RIA3 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC15.06■□□□□ 0
LOC285556D6RIA3 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.06■□□□□ 0
LOC285556D6RIA3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC15.06■□□□□ 0
LOC285556D6RIA3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.06■□□□□ 0
LOC285556D6RIA3 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC15.06■□□□□ 0
LOC285556D6RIA3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.06■□□□□ 0
LOC285556D6RIA3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LOC285556D6RIA3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
LOC285556D6RIA3 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LOC285556D6RIA3 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC15.06■□□□□ 0
LOC285556D6RIA3 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC15.06■□□□□ 0
LOC285556D6RIA3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC15.06■□□□□ 0
LOC285556D6RIA3 AL391903.1-201ENST00000407513 365 ntBASIC15.06■□□□□ 0
LOC285556D6RIA3 P2RX6P-202ENST00000450626 357 ntBASIC15.06■□□□□ 0
LOC285556D6RIA3 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC15.06■□□□□ 0
LOC285556D6RIA3 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC15.06■□□□□ 0
LOC285556D6RIA3 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC15.06■□□□□ 0
LOC285556D6RIA3 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
LOC285556D6RIA3 MED11-203ENST00000575284 652 ntTSL 3 BASIC15.06■□□□□ 0
LOC285556D6RIA3 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC15.06■□□□□ 0
LOC285556D6RIA3 RN7SL341P-201ENST00000613745 298 ntBASIC15.06■□□□□ 0
LOC285556D6RIA3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.05■□□□□ 0
LOC285556D6RIA3 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
LOC285556D6RIA3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LOC285556D6RIA3 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LOC285556D6RIA3 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC15.05■□□□□ 0
LOC285556D6RIA3 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LOC285556D6RIA3 LINGO1-AS1-201ENST00000558691 1720 ntTSL 1 (best) BASIC15.05■□□□□ 0
LOC285556D6RIA3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.05■□□□□ -0
LOC285556D6RIA3 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC15.05■□□□□ -0
LOC285556D6RIA3 TSPEAR-AS2-201ENST00000330490 823 ntTSL 1 (best) BASIC15.05■□□□□ -0
LOC285556D6RIA3 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC15.05■□□□□ -0
LOC285556D6RIA3 BX088651.3-201ENST00000418155 352 ntBASIC15.05■□□□□ -0
LOC285556D6RIA3 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC15.05■□□□□ -0
LOC285556D6RIA3 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC15.05■□□□□ -0
LOC285556D6RIA3 AC025257.1-201ENST00000550926 375 ntTSL 3 BASIC15.05■□□□□ -0
LOC285556D6RIA3 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC15.05■□□□□ -0
LOC285556D6RIA3 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC15.05■□□□□ -0
LOC285556D6RIA3 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC15.05■□□□□ -0
LOC285556D6RIA3 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC15.05■□□□□ -0
LOC285556D6RIA3 AL158032.2-201ENST00000616818 195 ntBASIC15.05■□□□□ -0
LOC285556D6RIA3 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC15.05■□□□□ -0
LOC285556D6RIA3 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC15.05■□□□□ -0
LOC285556D6RIA3 AC015656.1-201ENST00000624209 3578 ntBASIC15.05■□□□□ -0
LOC285556D6RIA3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
LOC285556D6RIA3 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC15.05■□□□□ -0
LOC285556D6RIA3 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LOC285556D6RIA3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LOC285556D6RIA3 YAP1P1-201ENST00000401504 1393 ntBASIC15.05■□□□□ -0
LOC285556D6RIA3 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LOC285556D6RIA3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.05■□□□□ -0
LOC285556D6RIA3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LOC285556D6RIA3 ALDH3B2-204ENST00000530069 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LOC285556D6RIA3 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LOC285556D6RIA3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
LOC285556D6RIA3 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LOC285556D6RIA3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LOC285556D6RIA3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.04■□□□□ -0
LOC285556D6RIA3 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LOC285556D6RIA3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.04■□□□□ -0
LOC285556D6RIA3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LOC285556D6RIA3 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LOC285556D6RIA3 OBP2A-202ENST00000342114 607 ntTSL 1 (best) BASIC15.04■□□□□ -0
LOC285556D6RIA3 RNA5SP248-201ENST00000365602 127 ntBASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms