Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 ZNF493-208ENST00000599461 1769 ntBASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 AL691447.1-201ENST00000419456 387 ntBASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 AC069218.1-201ENST00000435269 762 ntBASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 AC253536.4-201ENST00000440539 267 ntBASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 AC092473.1-201ENST00000441098 221 ntBASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 PRSS3P1-201ENST00000503996 742 ntBASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 RN7SKP155-201ENST00000516031 288 ntBASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 RNA5SP417-201ENST00000516459 108 ntBASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 AL132994.1-201ENST00000554098 400 ntBASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 MIR3180-2-201ENST00000581748 88 ntBASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 AC012073.1-201ENST00000606114 1108 ntBASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LYSMD3Q7Z3D4 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 AL358781.1-202ENST00000321081 1360 ntBASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 OR2W2P-201ENST00000406313 909 ntBASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 AC078991.1-201ENST00000437297 610 ntBASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 AC098935.1-201ENST00000446057 611 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms