Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CASP4P49662 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CASP4P49662 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 AL031719.1-201ENST00000623365 2587 ntBASIC14.94□□□□□ -0.02
CASP4P49662 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
CASP4P49662 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CASP4P49662 Z82170.1-201ENST00000625081 3192 ntBASIC14.94□□□□□ -0.02
CASP4P49662 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC14.94□□□□□ -0.02
CASP4P49662 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.94□□□□□ -0.02
CASP4P49662 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.94□□□□□ -0.02
CASP4P49662 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 AC092506.1-202ENST00000401022 528 ntBASIC14.94□□□□□ -0.02
CASP4P49662 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC14.94□□□□□ -0.02
CASP4P49662 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC14.94□□□□□ -0.02
CASP4P49662 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.94□□□□□ -0.02
CASP4P49662 RN7SL375P-201ENST00000492442 298 ntBASIC14.94□□□□□ -0.02
CASP4P49662 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC14.94□□□□□ -0.02
CASP4P49662 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.94□□□□□ -0.02
CASP4P49662 RNA5SP417-201ENST00000516459 108 ntBASIC14.94□□□□□ -0.02
CASP4P49662 RNA5SP423-201ENST00000517127 109 ntBASIC14.94□□□□□ -0.02
CASP4P49662 IGHV1-12-201ENST00000518307 205 ntBASIC14.94□□□□□ -0.02
CASP4P49662 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
CASP4P49662 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.94□□□□□ -0.02
CASP4P49662 MIR3180-2-201ENST00000581748 88 ntBASIC14.94□□□□□ -0.02
CASP4P49662 RPL17P45-201ENST00000586289 509 ntBASIC14.94□□□□□ -0.02
CASP4P49662 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.94□□□□□ -0.02
CASP4P49662 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CASP4P49662 AL805961.1-201ENST00000642026 753 ntBASIC14.94□□□□□ -0.02
CASP4P49662 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CASP4P49662 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CASP4P49662 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.94□□□□□ -0.02
CASP4P49662 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CASP4P49662 AC010970.1-201ENST00000445125 1848 ntBASIC14.94□□□□□ -0.02
CASP4P49662 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.94□□□□□ -0.02
CASP4P49662 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC14.94□□□□□ -0.02
CASP4P49662 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CASP4P49662 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CASP4P49662 PCDHB19P-202ENST00000625133 2914 ntBASIC14.93□□□□□ -0.02
CASP4P49662 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
CASP4P49662 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 AP000437.1-201ENST00000624057 2085 ntBASIC14.93□□□□□ -0.02
CASP4P49662 AL513497.1-201ENST00000624273 2083 ntBASIC14.93□□□□□ -0.02
CASP4P49662 AC060814.4-201ENST00000594169 2163 ntBASIC14.93□□□□□ -0.02
CASP4P49662 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.93□□□□□ -0.02
CASP4P49662 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.93□□□□□ -0.02
CASP4P49662 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.93□□□□□ -0.02
CASP4P49662 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.93□□□□□ -0.02
CASP4P49662 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.93□□□□□ -0.02
CASP4P49662 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC14.93□□□□□ -0.02
CASP4P49662 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.93□□□□□ -0.02
CASP4P49662 SAA2-206ENST00000530400 323 ntTSL 3 BASIC14.93□□□□□ -0.02
CASP4P49662 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.93□□□□□ -0.02
CASP4P49662 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.93□□□□□ -0.02
CASP4P49662 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.93□□□□□ -0.02
CASP4P49662 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.93□□□□□ -0.02
CASP4P49662 AC005618.3-201ENST00000624928 458 ntBASIC14.93□□□□□ -0.02
CASP4P49662 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CASP4P49662 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC14.93□□□□□ -0.02
CASP4P49662 AC024075.2-201ENST00000598112 1473 ntBASIC14.93□□□□□ -0.02
CASP4P49662 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CASP4P49662 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
CASP4P49662 PCDHB18P-202ENST00000526308 3197 ntBASIC14.93□□□□□ -0.02
CASP4P49662 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.93□□□□□ -0.02
CASP4P49662 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CASP4P49662 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms