Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC244452.3-201ENST00000636814 210 ntBASIC14.37□□□□□ -0.11
SLC1A1P43005 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC1A1P43005 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SLC1A1P43005 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC1A1P43005 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC1A1P43005 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.37□□□□□ -0.11
SLC1A1P43005 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC1A1P43005 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC1A1P43005 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC1A1P43005 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC1A1P43005 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC1A1P43005 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC1A1P43005 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC1A1P43005 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SLC1A1P43005 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC1A1P43005 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SLC1A1P43005 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SLC1A1P43005 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC1A1P43005 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC1A1P43005 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 SERF2-206ENST00000409291 807 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC1A1P43005 AC092573.1-201ENST00000433054 884 ntBASIC14.36□□□□□ -0.11
SLC1A1P43005 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC1A1P43005 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 AC073150.1-201ENST00000450406 1084 ntBASIC14.36□□□□□ -0.11
SLC1A1P43005 BX284668.4-201ENST00000453917 508 ntBASIC14.36□□□□□ -0.11
SLC1A1P43005 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC1A1P43005 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC1A1P43005 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC1A1P43005 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC1A1P43005 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.36□□□□□ -0.11
SLC1A1P43005 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC1A1P43005 SIGLEC22P-201ENST00000599104 714 ntBASIC14.36□□□□□ -0.11
SLC1A1P43005 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.36□□□□□ -0.11
SLC1A1P43005 AC012073.1-201ENST00000606114 1108 ntBASIC14.36□□□□□ -0.11
SLC1A1P43005 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SLC1A1P43005 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC1A1P43005 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC1A1P43005 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SLC1A1P43005 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 AC138028.6-201ENST00000616106 1482 ntBASIC14.36□□□□□ -0.11
SLC1A1P43005 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC1A1P43005 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A1P43005 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 POM121L4P-202ENST00000427789 1891 ntBASIC14.35□□□□□ -0.11
SLC1A1P43005 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC1A1P43005 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC1A1P43005 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SLC1A1P43005 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
SLC1A1P43005 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC1A1P43005 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A1P43005 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SLC1A1P43005 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SLC1A1P43005 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC1A1P43005 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms