Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MIR6125-201ENST00000618986 96 ntBASIC14.35□□□□□ -0.11
RB1P06400 AC138627.1-201ENST00000641127 1257 ntBASIC14.35□□□□□ -0.11
RB1P06400 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RB1P06400 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RB1P06400 AC007191.1-201ENST00000623179 2995 ntBASIC14.35□□□□□ -0.11
RB1P06400 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.35□□□□□ -0.11
RB1P06400 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RB1P06400 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RB1P06400 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RB1P06400 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RB1P06400 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC14.35□□□□□ -0.11
RB1P06400 AC015813.5-201ENST00000624641 1514 ntBASIC14.35□□□□□ -0.11
RB1P06400 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RB1P06400 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RB1P06400 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RB1P06400 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RB1P06400 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RB1P06400 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RB1P06400 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.34□□□□□ -0.11
RB1P06400 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC14.34□□□□□ -0.11
RB1P06400 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.34□□□□□ -0.11
RB1P06400 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RB1P06400 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RB1P06400 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 RN7SKP255-201ENST00000363442 313 ntBASIC14.34□□□□□ -0.11
RB1P06400 RN7SKP203-201ENST00000363618 332 ntBASIC14.34□□□□□ -0.11
RB1P06400 RN7SKP71-201ENST00000364558 318 ntBASIC14.34□□□□□ -0.11
RB1P06400 7SK.1-201ENST00000365328 331 ntBASIC14.34□□□□□ -0.11
RB1P06400 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC14.34□□□□□ -0.11
RB1P06400 OR2T32P-201ENST00000403423 963 ntBASIC14.34□□□□□ -0.11
RB1P06400 AP001331.1-201ENST00000413008 1015 ntBASIC14.34□□□□□ -0.11
RB1P06400 AKR1C6P-201ENST00000432950 983 ntBASIC14.34□□□□□ -0.11
RB1P06400 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC14.34□□□□□ -0.11
RB1P06400 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC14.34□□□□□ -0.11
RB1P06400 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC14.34□□□□□ -0.11
RB1P06400 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC14.34□□□□□ -0.11
RB1P06400 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC14.34□□□□□ -0.11
RB1P06400 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC14.34□□□□□ -0.11
RB1P06400 AC211476.2-201ENST00000608799 708 ntBASIC14.34□□□□□ -0.11
RB1P06400 AL512324.3-201ENST00000619383 882 ntBASIC14.34□□□□□ -0.11
RB1P06400 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.34□□□□□ -0.11
RB1P06400 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RB1P06400 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.34□□□□□ -0.11
RB1P06400 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.34□□□□□ -0.11
RB1P06400 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC14.34□□□□□ -0.11
RB1P06400 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RB1P06400 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RB1P06400 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RB1P06400 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RB1P06400 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.33□□□□□ -0.11
RB1P06400 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RB1P06400 CA6-205ENST00000480186 1493 ntTSL 2 BASIC14.33□□□□□ -0.12
RB1P06400 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
RB1P06400 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RB1P06400 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RB1P06400 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RB1P06400 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RB1P06400 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RB1P06400 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RB1P06400 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RB1P06400 TCAM1P-207ENST00000485295 1537 ntBASIC14.33□□□□□ -0.12
RB1P06400 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RB1P06400 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RB1P06400 AC024475.2-201ENST00000312173 879 ntBASIC14.33□□□□□ -0.12
RB1P06400 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RB1P06400 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC14.33□□□□□ -0.12
RB1P06400 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RB1P06400 RN7SL2-201ENST00000490232 300 ntBASIC14.33□□□□□ -0.12
RB1P06400 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RB1P06400 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RB1P06400 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC14.33□□□□□ -0.12
RB1P06400 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC14.33□□□□□ -0.12
RB1P06400 RN7SL4P-201ENST00000584058 295 ntBASIC14.33□□□□□ -0.12
RB1P06400 IFNL3P1-201ENST00000595082 501 ntBASIC14.33□□□□□ -0.12
RB1P06400 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RB1P06400 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.33□□□□□ -0.12
RB1P06400 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.33□□□□□ -0.12
RB1P06400 ERG-211ENST00000453032 1595 ntTSL 2 BASIC14.33□□□□□ -0.12
RB1P06400 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.33□□□□□ -0.12
RB1P06400 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RB1P06400 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RB1P06400 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.33□□□□□ -0.12
RB1P06400 MKRN7P-201ENST00000433469 1371 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms