Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AL356737.1-201ENST00000634391 234 ntBASIC10.89□□□□□ -0.67
IFNA1P01562 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
IFNA1P01562 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
IFNA1P01562 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
IFNA1P01562 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC10.89□□□□□ -0.67
IFNA1P01562 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 COL5A2-203ENST00000618828 6399 ntTSL 5 BASIC10.89□□□□□ -0.67
IFNA1P01562 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
IFNA1P01562 LINC02228-202ENST00000641261 2489 ntBASIC10.89□□□□□ -0.67
IFNA1P01562 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC10.88□□□□□ -0.67
IFNA1P01562 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 SALL2-207ENST00000614342 4942 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 NRAP-203ENST00000369358 5534 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 SCN4A-201ENST00000435607 7805 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC10.88□□□□□ -0.67
IFNA1P01562 COL14A1-203ENST00000309791 6163 ntTSL 5 BASIC10.88□□□□□ -0.67
IFNA1P01562 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC10.88□□□□□ -0.67
IFNA1P01562 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 HNRNPA1P2-207ENST00000432375 960 ntBASIC10.88□□□□□ -0.67
IFNA1P01562 CICP12-201ENST00000455801 843 ntBASIC10.88□□□□□ -0.67
IFNA1P01562 GOLGA2P8-201ENST00000505201 779 ntBASIC10.88□□□□□ -0.67
IFNA1P01562 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC10.88□□□□□ -0.67
IFNA1P01562 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 AC104596.2-201ENST00000512793 793 ntBASIC10.88□□□□□ -0.67
IFNA1P01562 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 AC027369.6-201ENST00000525520 931 ntBASIC10.88□□□□□ -0.67
IFNA1P01562 FTH1-202ENST00000526640 786 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.88□□□□□ -0.67
IFNA1P01562 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC10.88□□□□□ -0.67
IFNA1P01562 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC10.88□□□□□ -0.67
IFNA1P01562 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC10.88□□□□□ -0.67
IFNA1P01562 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC10.88□□□□□ -0.67
IFNA1P01562 SRD5A3P1-201ENST00000603021 949 ntBASIC10.88□□□□□ -0.67
IFNA1P01562 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 AL844908.2-201ENST00000609461 460 ntBASIC10.88□□□□□ -0.67
IFNA1P01562 AL161773.1-201ENST00000624845 863 ntBASIC10.88□□□□□ -0.67
IFNA1P01562 NRXN3-217ENST00000634499 6069 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
IFNA1P01562 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC10.88□□□□□ -0.67
IFNA1P01562 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC10.88□□□□□ -0.67
IFNA1P01562 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 GABPB1-203ENST00000380877 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
IFNA1P01562 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
IFNA1P01562 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 ENPP4-201ENST00000321037 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 TMEM59-201ENST00000234831 6691 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 GDA-203ENST00000376986 1771 ntTSL 2 BASIC10.88□□□□□ -0.67
IFNA1P01562 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 FCHSD1-201ENST00000435817 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
IFNA1P01562 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
IFNA1P01562 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
IFNA1P01562 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
IFNA1P01562 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
IFNA1P01562 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
IFNA1P01562 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
IFNA1P01562 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
IFNA1P01562 PTK2B-203ENST00000397501 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
IFNA1P01562 VCPIP1-201ENST00000310421 9942 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
IFNA1P01562 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
IFNA1P01562 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC10.87□□□□□ -0.67
IFNA1P01562 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms