Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 CLNS1A-201ENST00000263309 1172 ntTSL 3 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 IGKV6-21-201ENST00000390256 406 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 AL353803.1-201ENST00000439014 800 ntTSL 2 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 LAMTOR4-207ENST00000474141 519 ntTSL 2 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 KRT19P3-201ENST00000507547 828 ntBASIC12.34□□□□□ -0.43
CHD8Q9HCK8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 SH3GL1P2-201ENST00000582245 1082 ntBASIC12.34□□□□□ -0.43
CHD8Q9HCK8 ADGRG5-207ENST00000615867 762 ntTSL 4 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 AC012617.1-204ENST00000586340 2305 ntBASIC12.34□□□□□ -0.43
CHD8Q9HCK8 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 AL391987.4-201ENST00000377547 439 ntTSL 3 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 KRTAP12-4-201ENST00000391618 447 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 AL121892.1-201ENST00000422574 833 ntTSL 3 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 GAPDHP29-201ENST00000429913 985 ntBASIC12.34□□□□□ -0.43
CHD8Q9HCK8 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 MIR4296-201ENST00000581038 88 ntBASIC12.34□□□□□ -0.43
CHD8Q9HCK8 C17orf75-202ENST00000577809 1642 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 EIF3LP1-201ENST00000554099 1658 ntBASIC12.34□□□□□ -0.43
CHD8Q9HCK8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHD8Q9HCK8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CHD8Q9HCK8 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
CHD8Q9HCK8 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
CHD8Q9HCK8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
CHD8Q9HCK8 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.33□□□□□ -0.43
CHD8Q9HCK8 SNORD23-201ENST00000408876 110 ntBASIC12.33□□□□□ -0.43
CHD8Q9HCK8 ITPKB-IT1-201ENST00000412918 746 ntTSL 2 BASIC12.33□□□□□ -0.43
CHD8Q9HCK8 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC12.33□□□□□ -0.43
CHD8Q9HCK8 PQLC1P1-201ENST00000434950 429 ntBASIC12.33□□□□□ -0.43
CHD8Q9HCK8 MED15P7-201ENST00000435410 822 ntBASIC12.33□□□□□ -0.43
CHD8Q9HCK8 AC099541.1-201ENST00000453828 670 ntTSL 2 BASIC12.33□□□□□ -0.43
CHD8Q9HCK8 EHMT1-210ENST00000478940 591 ntTSL 4 BASIC12.33□□□□□ -0.43
CHD8Q9HCK8 AC012313.9-201ENST00000619318 633 ntBASIC12.33□□□□□ -0.43
CHD8Q9HCK8 AL353801.2-201ENST00000436877 1444 ntTSL 5 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 TMBIM7P-203ENST00000641617 1718 ntBASIC12.33□□□□□ -0.44
CHD8Q9HCK8 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 LRRC6-201ENST00000250173 1672 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 FAM49B-220ENST00000522250 1647 ntTSL 5 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 QRFPR-201ENST00000334383 1215 ntTSL 2 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 AQP7P1-201ENST00000412626 1045 ntBASIC12.33□□□□□ -0.44
CHD8Q9HCK8 FGL1-206ENST00000518650 1093 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 AC091153.4-201ENST00000570493 480 ntTSL 5 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 ACAP1-204ENST00000570504 274 ntTSL 3 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHD8Q9HCK8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms