Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC16.48■□□□□ 0.23
EYA3Q99504 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC16.48■□□□□ 0.23
EYA3Q99504 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
EYA3Q99504 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC16.48■□□□□ 0.23
EYA3Q99504 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EYA3Q99504 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EYA3Q99504 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EYA3Q99504 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EYA3Q99504 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EYA3Q99504 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EYA3Q99504 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EYA3Q99504 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EYA3Q99504 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EYA3Q99504 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.48■□□□□ 0.23
EYA3Q99504 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EYA3Q99504 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
EYA3Q99504 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC16.47■□□□□ 0.23
EYA3Q99504 AL050341.2-201ENST00000567508 1541 ntBASIC16.47■□□□□ 0.23
EYA3Q99504 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
EYA3Q99504 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
EYA3Q99504 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 DNM1P46-202ENST00000415963 882 ntBASIC16.47■□□□□ 0.23
EYA3Q99504 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC16.47■□□□□ 0.23
EYA3Q99504 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC16.47■□□□□ 0.23
EYA3Q99504 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
EYA3Q99504 SNRPD2P2-201ENST00000473818 333 ntBASIC16.47■□□□□ 0.23
EYA3Q99504 RN7SL838P-201ENST00000481676 295 ntBASIC16.47■□□□□ 0.23
EYA3Q99504 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 ISL1-203ENST00000511384 981 ntTSL 5 BASIC16.47■□□□□ 0.23
EYA3Q99504 AC011431.1-201ENST00000512971 230 ntBASIC16.47■□□□□ 0.23
EYA3Q99504 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC16.47■□□□□ 0.23
EYA3Q99504 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
EYA3Q99504 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
EYA3Q99504 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC16.47■□□□□ 0.23
EYA3Q99504 KRT18P8-201ENST00000581937 1246 ntBASIC16.47■□□□□ 0.23
EYA3Q99504 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
EYA3Q99504 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC16.47■□□□□ 0.23
EYA3Q99504 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 AC034205.3-201ENST00000603595 1376 ntBASIC16.47■□□□□ 0.23
EYA3Q99504 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
EYA3Q99504 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EYA3Q99504 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
EYA3Q99504 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.47■□□□□ 0.23
EYA3Q99504 AC026748.1-201ENST00000624349 3251 ntBASIC16.46■□□□□ 0.23
EYA3Q99504 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.46■□□□□ 0.23
EYA3Q99504 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC16.46■□□□□ 0.23
EYA3Q99504 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EYA3Q99504 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EYA3Q99504 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EYA3Q99504 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EYA3Q99504 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.46■□□□□ 0.23
EYA3Q99504 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EYA3Q99504 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
EYA3Q99504 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
EYA3Q99504 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EYA3Q99504 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.46■□□□□ 0.23
EYA3Q99504 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EYA3Q99504 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
EYA3Q99504 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC16.46■□□□□ 0.23
EYA3Q99504 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC16.46■□□□□ 0.23
EYA3Q99504 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EYA3Q99504 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EYA3Q99504 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC16.46■□□□□ 0.23
EYA3Q99504 AF186996.6-201ENST00000485294 149 ntBASIC16.46■□□□□ 0.23
EYA3Q99504 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EYA3Q99504 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC16.46■□□□□ 0.23
EYA3Q99504 PCTP-206ENST00000573500 919 ntTSL 3 BASIC16.46■□□□□ 0.23
EYA3Q99504 NAA38-204ENST00000575208 529 ntTSL 3 BASIC16.46■□□□□ 0.23
EYA3Q99504 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC16.46■□□□□ 0.23
EYA3Q99504 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC16.46■□□□□ 0.23
EYA3Q99504 AP001462.1-201ENST00000594089 452 ntBASIC16.46■□□□□ 0.23
EYA3Q99504 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC16.46■□□□□ 0.23
EYA3Q99504 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
EYA3Q99504 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EYA3Q99504 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.46■□□□□ 0.23
EYA3Q99504 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
EYA3Q99504 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
EYA3Q99504 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.46■□□□□ 0.23
EYA3Q99504 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
EYA3Q99504 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.22
EYA3Q99504 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
EYA3Q99504 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
EYA3Q99504 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms