Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 AC009474.1-201ENST00000455096 1565 ntBASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 AC108024.1-201ENST00000626286 1721 ntBASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 AC004623.1-201ENST00000624592 2127 ntBASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 RN7SL767P-201ENST00000493013 295 ntBASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD3Q7Z3D4 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 AC106827.1-201ENST00000366454 431 ntBASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 GGTLC4P-201ENST00000402176 664 ntBASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 OR52M2P-201ENST00000414298 959 ntBASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 SNORD3B-1-201ENST00000577988 758 ntBASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 AL359091.4-201ENST00000610052 409 ntBASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 MIR6727-201ENST00000620702 65 ntBASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 YRDCP1-201ENST00000621419 643 ntBASIC13.86□□□□□ -0.19
LYSMD3Q7Z3D4 AC025262.2-201ENST00000623975 1056 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms