Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 MPI-208ENST00000563786 1707 ntTSL 5 BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC19.89■□□□□ 0.77
CDC42BPAQ5VT25 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 TFAM-201ENST00000373895 973 ntTSL 2 BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 SLC25A6P1-201ENST00000412123 775 ntBASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 AP006248.1-201ENST00000610471 67 ntBASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 AC068987.3-201ENST00000637934 1195 ntTSL 5 BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 F2-205ENST00000530231 1849 ntTSL 5 BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 DDX12P-201ENST00000432996 2947 ntBASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 MIR193A-201ENST00000384882 88 ntBASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 AC090616.6-202ENST00000583601 1088 ntBASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 RN7SL341P-201ENST00000613745 298 ntBASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC19.88■□□□□ 0.77
CDC42BPAQ5VT25 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 AC099063.4-201ENST00000641099 1602 ntBASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 CYP20A1-210ENST00000613925 1986 ntTSL 2 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 AGAP12P-201ENST00000585227 2359 ntBASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 CETP-203ENST00000566128 1733 ntTSL 5 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 AC012513.2-201ENST00000441511 1137 ntBASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 AC099681.2-201ENST00000449899 543 ntTSL 4 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 FPGT-205ENST00000482102 561 ntTSL 4 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 FP325317.1-201ENST00000539936 1042 ntBASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 AC011603.2-201ENST00000548149 675 ntTSL 3 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 IGHV3OR16-11-201ENST00000565524 349 ntBASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 AC106774.4-201ENST00000600799 409 ntBASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 AC020763.2-201ENST00000623155 1255 ntBASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 AC073592.10-201ENST00000624789 597 ntBASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 OS9-204ENST00000389146 2091 ntTSL 2 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 OSER1-AS1-202ENST00000437730 1563 ntTSL 5 BASIC19.87■□□□□ 0.77
CDC42BPAQ5VT25 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 LILRA2-204ENST00000391738 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 KRT18P39-201ENST00000415349 1299 ntBASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 RPL19P20-201ENST00000415648 591 ntBASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 RN7SL363P-201ENST00000482412 273 ntBASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 DEGS2-202ENST00000553834 421 ntTSL 3 BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 HCG18-241ENST00000602290 821 ntTSL 2 BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 AC005014.1-201ENST00000432006 2976 ntBASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42BPAQ5VT25 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms