Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 AADAC-202ENST00000488869 719 ntTSL 2 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 AC084262.1-201ENST00000567818 751 ntBASIC16.85■□□□□ 0.29
RC3H1Q5TC82 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 AL033381.2-201ENST00000603854 732 ntBASIC16.85■□□□□ 0.29
RC3H1Q5TC82 AC009118.3-201ENST00000622896 873 ntBASIC16.85■□□□□ 0.29
RC3H1Q5TC82 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 CYP2B7P-201ENST00000541697 1476 ntBASIC16.85■□□□□ 0.29
RC3H1Q5TC82 KRT8P5-201ENST00000592443 1458 ntBASIC16.85■□□□□ 0.29
RC3H1Q5TC82 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 ZNF493-208ENST00000599461 1769 ntBASIC16.84■□□□□ 0.29
RC3H1Q5TC82 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 RHPN1-AS1-201ENST00000518049 1918 ntBASIC16.84■□□□□ 0.29
RC3H1Q5TC82 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 COQ4-202ENST00000372875 928 ntTSL 2 BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 CLK2P1-201ENST00000416636 1294 ntBASIC16.84■□□□□ 0.29
RC3H1Q5TC82 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 AC114781.1-201ENST00000450559 1028 ntBASIC16.84■□□□□ 0.29
RC3H1Q5TC82 RN7SL16P-201ENST00000476316 269 ntBASIC16.84■□□□□ 0.29
RC3H1Q5TC82 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 AL136298.3-201ENST00000556746 445 ntBASIC16.84■□□□□ 0.29
RC3H1Q5TC82 IGHV1OR16-3-201ENST00000568138 205 ntBASIC16.84■□□□□ 0.29
RC3H1Q5TC82 AC131274.3-201ENST00000578745 1271 ntBASIC16.84■□□□□ 0.29
RC3H1Q5TC82 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 AHCYP7-201ENST00000560847 1308 ntBASIC16.84■□□□□ 0.29
RC3H1Q5TC82 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 CR383656.2-201ENST00000548656 2254 ntBASIC16.84■□□□□ 0.29
RC3H1Q5TC82 MANEA-AS1-201ENST00000564541 2268 ntBASIC16.84■□□□□ 0.29
RC3H1Q5TC82 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.84■□□□□ 0.29
RC3H1Q5TC82 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.83■□□□□ 0.29
RC3H1Q5TC82 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RC3H1Q5TC82 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
RC3H1Q5TC82 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
RC3H1Q5TC82 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC16.83■□□□□ 0.29
RC3H1Q5TC82 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RC3H1Q5TC82 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RC3H1Q5TC82 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
RC3H1Q5TC82 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC16.83■□□□□ 0.28
RC3H1Q5TC82 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms