Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.26□□□□□ -0.45
GFRA1P56159 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC12.25□□□□□ -0.45
GFRA1P56159 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
GFRA1P56159 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
GFRA1P56159 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.25□□□□□ -0.45
GFRA1P56159 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
GFRA1P56159 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC12.25□□□□□ -0.45
GFRA1P56159 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
GFRA1P56159 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC12.25□□□□□ -0.45
GFRA1P56159 TREHP1-201ENST00000531328 465 ntBASIC12.25□□□□□ -0.45
GFRA1P56159 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC12.25□□□□□ -0.45
GFRA1P56159 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC12.25□□□□□ -0.45
GFRA1P56159 C2orf69P1-201ENST00000563532 1093 ntBASIC12.25□□□□□ -0.45
GFRA1P56159 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC12.25□□□□□ -0.45
GFRA1P56159 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC12.25□□□□□ -0.45
GFRA1P56159 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC12.25□□□□□ -0.45
GFRA1P56159 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC12.25□□□□□ -0.45
GFRA1P56159 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC12.25□□□□□ -0.45
GFRA1P56159 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC12.25□□□□□ -0.45
GFRA1P56159 AC073592.2-201ENST00000623062 780 ntBASIC12.25□□□□□ -0.45
GFRA1P56159 AC137723.2-201ENST00000623540 398 ntBASIC12.25□□□□□ -0.45
GFRA1P56159 AC026336.4-201ENST00000624565 1050 ntBASIC12.25□□□□□ -0.45
GFRA1P56159 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.25□□□□□ -0.45
GFRA1P56159 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.25□□□□□ -0.45
GFRA1P56159 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.25□□□□□ -0.45
GFRA1P56159 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
GFRA1P56159 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
GFRA1P56159 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.25□□□□□ -0.45
GFRA1P56159 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
GFRA1P56159 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
GFRA1P56159 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
GFRA1P56159 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
GFRA1P56159 PI4KAP2-201ENST00000360806 2080 ntBASIC12.24□□□□□ -0.45
GFRA1P56159 AC022080.1-201ENST00000366255 781 ntBASIC12.24□□□□□ -0.45
GFRA1P56159 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC12.24□□□□□ -0.45
GFRA1P56159 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
GFRA1P56159 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC12.24□□□□□ -0.45
GFRA1P56159 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC12.24□□□□□ -0.45
GFRA1P56159 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.24□□□□□ -0.45
GFRA1P56159 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC12.24□□□□□ -0.45
GFRA1P56159 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
GFRA1P56159 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.24□□□□□ -0.45
GFRA1P56159 KRT18P46-201ENST00000435568 1279 ntBASIC12.24□□□□□ -0.45
GFRA1P56159 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.24□□□□□ -0.45
GFRA1P56159 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
GFRA1P56159 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.24□□□□□ -0.45
GFRA1P56159 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
GFRA1P56159 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
GFRA1P56159 AC087203.1-201ENST00000532111 1181 ntBASIC12.24□□□□□ -0.45
GFRA1P56159 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GFRA1P56159 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms