Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC10.09□□□□□ -0.79
APOC4P55056 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOC4P55056 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
APOC4P55056 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
APOC4P55056 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC10.08□□□□□ -0.8
APOC4P55056 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
APOC4P55056 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 AL359881.3-201ENST00000602640 1721 ntBASIC10.08□□□□□ -0.8
APOC4P55056 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC10.08□□□□□ -0.8
APOC4P55056 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 SNU13-204ENST00000402458 462 ntTSL 3 BASIC10.08□□□□□ -0.8
APOC4P55056 STK16-203ENST00000409516 895 ntTSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC10.08□□□□□ -0.8
APOC4P55056 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 AC097065.1-201ENST00000425737 517 ntBASIC10.08□□□□□ -0.8
APOC4P55056 ASS1P2-201ENST00000439895 1223 ntBASIC10.08□□□□□ -0.8
APOC4P55056 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 PPIA-208ENST00000489459 907 ntTSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 AC090136.2-201ENST00000517809 420 ntBASIC10.08□□□□□ -0.8
APOC4P55056 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
APOC4P55056 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 BAK1P2-201ENST00000532665 631 ntBASIC10.08□□□□□ -0.8
APOC4P55056 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 FOXN3-AS2-201ENST00000554071 1262 ntBASIC10.08□□□□□ -0.8
APOC4P55056 MT2A-202ENST00000561491 581 ntTSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC10.08□□□□□ -0.8
APOC4P55056 MIR5196-201ENST00000578146 115 ntBASIC10.08□□□□□ -0.8
APOC4P55056 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC10.08□□□□□ -0.8
APOC4P55056 AC008972.2-201ENST00000606587 494 ntBASIC10.08□□□□□ -0.8
APOC4P55056 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 PPIA-210ENST00000620047 827 ntTSL 5 BASIC10.08□□□□□ -0.8
APOC4P55056 LINC00431-202ENST00000636375 159 ntBASIC10.08□□□□□ -0.8
APOC4P55056 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC10.08□□□□□ -0.8
APOC4P55056 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 AP002360.1-203ENST00000321844 5363 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC10.08□□□□□ -0.8
APOC4P55056 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC10.08□□□□□ -0.8
APOC4P55056 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
APOC4P55056 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
APOC4P55056 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
APOC4P55056 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 GOLGA8DP-202ENST00000341390 2184 ntBASIC10.08□□□□□ -0.8
APOC4P55056 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC10.08□□□□□ -0.8
APOC4P55056 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC10.08□□□□□ -0.8
APOC4P55056 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 AR-208ENST00000612452 10676 ntTSL 5 BASIC10.08□□□□□ -0.8
APOC4P55056 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC10.08□□□□□ -0.8
APOC4P55056 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
APOC4P55056 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
APOC4P55056 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC10.08□□□□□ -0.8
APOC4P55056 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOC4P55056 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms