Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC19.81■□□□□ 0.76
KDM5CP41229 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
KDM5CP41229 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC19.81■□□□□ 0.76
KDM5CP41229 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDM5CP41229 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC19.81■□□□□ 0.76
KDM5CP41229 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KDM5CP41229 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDM5CP41229 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDM5CP41229 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KDM5CP41229 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
KDM5CP41229 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDM5CP41229 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDM5CP41229 AL136379.1-201ENST00000623471 2642 ntBASIC19.81■□□□□ 0.76
KDM5CP41229 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDM5CP41229 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC19.8■□□□□ 0.76
KDM5CP41229 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC19.8■□□□□ 0.76
KDM5CP41229 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
KDM5CP41229 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC19.8■□□□□ 0.76
KDM5CP41229 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
KDM5CP41229 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KDM5CP41229 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
KDM5CP41229 AL139424.2-202ENST00000641335 1369 ntBASIC19.8■□□□□ 0.76
KDM5CP41229 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC19.8■□□□□ 0.76
KDM5CP41229 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 RPL21P135-201ENST00000442539 791 ntBASIC19.8■□□□□ 0.76
KDM5CP41229 FTLP16-201ENST00000446400 513 ntBASIC19.8■□□□□ 0.76
KDM5CP41229 AL929472.4-201ENST00000447422 691 ntBASIC19.8■□□□□ 0.76
KDM5CP41229 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC19.8■□□□□ 0.76
KDM5CP41229 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 AC007336.3-201ENST00000623886 2160 ntBASIC19.8■□□□□ 0.76
KDM5CP41229 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDM5CP41229 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
KDM5CP41229 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
KDM5CP41229 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC19.8■□□□□ 0.76
KDM5CP41229 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
KDM5CP41229 FAM90A27P-201ENST00000593323 1370 ntBASIC19.79■□□□□ 0.76
KDM5CP41229 FAM90A28P-202ENST00000597191 1374 ntBASIC19.79■□□□□ 0.76
KDM5CP41229 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KDM5CP41229 AC069061.4-201ENST00000581294 1347 ntBASIC19.79■□□□□ 0.76
KDM5CP41229 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KDM5CP41229 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
KDM5CP41229 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC19.79■□□□□ 0.76
KDM5CP41229 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
KDM5CP41229 IL6RP1-201ENST00000417848 1273 ntBASIC19.79■□□□□ 0.76
KDM5CP41229 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC19.79■□□□□ 0.76
KDM5CP41229 MIR4459-201ENST00000581837 66 ntBASIC19.79■□□□□ 0.76
KDM5CP41229 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC19.79■□□□□ 0.76
KDM5CP41229 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM5CP41229 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM5CP41229 MIR6871-201ENST00000613433 56 ntBASIC19.79■□□□□ 0.76
KDM5CP41229 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC19.79■□□□□ 0.76
KDM5CP41229 Z98259.1-201ENST00000564261 1697 ntBASIC19.79■□□□□ 0.76
KDM5CP41229 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM5CP41229 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM5CP41229 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC19.79■□□□□ 0.76
KDM5CP41229 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM5CP41229 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM5CP41229 RHPN1-AS1-201ENST00000518049 1918 ntBASIC19.79■□□□□ 0.76
KDM5CP41229 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.79■□□□□ 0.76
KDM5CP41229 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM5CP41229 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
KDM5CP41229 AC023830.3-201ENST00000612995 1455 ntBASIC19.79■□□□□ 0.76
KDM5CP41229 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
KDM5CP41229 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
KDM5CP41229 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC19.79■□□□□ 0.76
KDM5CP41229 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
KDM5CP41229 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM5CP41229 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KDM5CP41229 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM5CP41229 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM5CP41229 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM5CP41229 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM5CP41229 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC19.79■□□□□ 0.76
KDM5CP41229 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
KDM5CP41229 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
KDM5CP41229 SOD1-202ENST00000389995 865 ntTSL 3 BASIC19.78■□□□□ 0.76
KDM5CP41229 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC19.78■□□□□ 0.76
KDM5CP41229 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC19.78■□□□□ 0.76
KDM5CP41229 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC19.78■□□□□ 0.76
KDM5CP41229 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 POM121L4P-202ENST00000427789 1891 ntBASIC19.78■□□□□ 0.76
KDM5CP41229 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KDM5CP41229 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms