Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA5P30532 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CHRNA5P30532 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CHRNA5P30532 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNA5P30532 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNA5P30532 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CHRNA5P30532 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
CHRNA5P30532 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CHRNA5P30532 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CHRNA5P30532 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 FTLP3-201ENST00000427242 528 ntBASIC16.48■□□□□ 0.23
CHRNA5P30532 AC139143.1-201ENST00000441772 1207 ntBASIC16.48■□□□□ 0.23
CHRNA5P30532 FPGT-205ENST00000482102 561 ntTSL 4 BASIC16.48■□□□□ 0.23
CHRNA5P30532 DIS3L2P1-201ENST00000509197 559 ntBASIC16.48■□□□□ 0.23
CHRNA5P30532 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC16.48■□□□□ 0.23
CHRNA5P30532 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNA5P30532 FP325317.1-201ENST00000539936 1042 ntBASIC16.48■□□□□ 0.23
CHRNA5P30532 FOS-205ENST00000555242 629 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNA5P30532 CALM3-206ENST00000594523 540 ntTSL 4 BASIC16.48■□□□□ 0.23
CHRNA5P30532 AL033381.2-201ENST00000603854 732 ntBASIC16.48■□□□□ 0.23
CHRNA5P30532 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRNA5P30532 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNA5P30532 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CHRNA5P30532 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRNA5P30532 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHRNA5P30532 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CHRNA5P30532 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CHRNA5P30532 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA5P30532 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRNA5P30532 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHRNA5P30532 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA5P30532 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA5P30532 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA5P30532 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA5P30532 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHRNA5P30532 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHRNA5P30532 COQ4-202ENST00000372875 928 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA5P30532 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC16.47■□□□□ 0.23
CHRNA5P30532 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC16.47■□□□□ 0.23
CHRNA5P30532 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC16.47■□□□□ 0.23
CHRNA5P30532 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA5P30532 RN7SL76P-201ENST00000482435 289 ntBASIC16.47■□□□□ 0.23
CHRNA5P30532 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHRNA5P30532 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC16.47■□□□□ 0.23
CHRNA5P30532 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC16.47■□□□□ 0.23
CHRNA5P30532 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC16.47■□□□□ 0.23
CHRNA5P30532 MIR4539-201ENST00000579784 60 ntBASIC16.47■□□□□ 0.23
CHRNA5P30532 AC090616.6-202ENST00000583601 1088 ntBASIC16.47■□□□□ 0.23
CHRNA5P30532 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC16.47■□□□□ 0.23
CHRNA5P30532 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA5P30532 FAM223B-202ENST00000598177 713 ntBASIC16.47■□□□□ 0.23
CHRNA5P30532 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC16.47■□□□□ 0.23
CHRNA5P30532 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 FAM223A-202ENST00000625204 713 ntBASIC16.47■□□□□ 0.23
CHRNA5P30532 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHRNA5P30532 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA5P30532 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA5P30532 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA5P30532 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA5P30532 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA5P30532 MST1P2-201ENST00000457982 2291 ntBASIC16.47■□□□□ 0.23
CHRNA5P30532 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA5P30532 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA5P30532 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA5P30532 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA5P30532 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA5P30532 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA5P30532 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms