Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSF1RP07333 AL445250.1-201ENST00000641671 2259 ntBASIC16.58■□□□□ 0.25
CSF1RP07333 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CSF1RP07333 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CSF1RP07333 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CSF1RP07333 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSF1RP07333 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CSF1RP07333 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.58■□□□□ 0.24
CSF1RP07333 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC16.58■□□□□ 0.24
CSF1RP07333 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1RP07333 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CSF1RP07333 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1RP07333 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC16.58■□□□□ 0.24
CSF1RP07333 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC16.58■□□□□ 0.24
CSF1RP07333 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.58■□□□□ 0.24
CSF1RP07333 AC092612.1-201ENST00000514501 998 ntBASIC16.58■□□□□ 0.24
CSF1RP07333 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC16.58■□□□□ 0.24
CSF1RP07333 AL137779.3-201ENST00000553295 729 ntBASIC16.58■□□□□ 0.24
CSF1RP07333 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC16.58■□□□□ 0.24
CSF1RP07333 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC16.58■□□□□ 0.24
CSF1RP07333 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC16.58■□□□□ 0.24
CSF1RP07333 AL627230.2-201ENST00000613254 655 ntBASIC16.58■□□□□ 0.24
CSF1RP07333 AC018695.6-201ENST00000614011 534 ntBASIC16.58■□□□□ 0.24
CSF1RP07333 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1RP07333 AC008622.3-201ENST00000621170 600 ntBASIC16.58■□□□□ 0.24
CSF1RP07333 AC244097.1-201ENST00000621631 1216 ntBASIC16.58■□□□□ 0.24
CSF1RP07333 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.58■□□□□ 0.24
CSF1RP07333 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1RP07333 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1RP07333 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1RP07333 Z98259.1-201ENST00000564261 1697 ntBASIC16.58■□□□□ 0.24
CSF1RP07333 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1RP07333 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1RP07333 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.58■□□□□ 0.24
CSF1RP07333 CICP9-201ENST00000444451 1913 ntBASIC16.58■□□□□ 0.24
CSF1RP07333 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.58■□□□□ 0.24
CSF1RP07333 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
CSF1RP07333 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CSF1RP07333 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CSF1RP07333 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1RP07333 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CSF1RP07333 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1RP07333 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CSF1RP07333 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1RP07333 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CSF1RP07333 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSF1RP07333 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CSF1RP07333 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.57■□□□□ 0.24
CSF1RP07333 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.57■□□□□ 0.24
CSF1RP07333 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC16.57■□□□□ 0.24
CSF1RP07333 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 TUBB8P5-201ENST00000445286 1351 ntBASIC16.57■□□□□ 0.24
CSF1RP07333 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC16.57■□□□□ 0.24
CSF1RP07333 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.57■□□□□ 0.24
CSF1RP07333 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC16.57■□□□□ 0.24
CSF1RP07333 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC16.57■□□□□ 0.24
CSF1RP07333 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC16.57■□□□□ 0.24
CSF1RP07333 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC16.57■□□□□ 0.24
CSF1RP07333 AC027612.2-202ENST00000445955 1199 ntBASIC16.57■□□□□ 0.24
CSF1RP07333 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CSF1RP07333 AL590235.1-201ENST00000564650 861 ntBASIC16.57■□□□□ 0.24
CSF1RP07333 AC027139.1-201ENST00000565286 951 ntBASIC16.57■□□□□ 0.24
CSF1RP07333 METTL23-211ENST00000589977 617 ntTSL 3 BASIC16.57■□□□□ 0.24
CSF1RP07333 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.57■□□□□ 0.24
CSF1RP07333 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.57■□□□□ 0.24
CSF1RP07333 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC16.57■□□□□ 0.24
CSF1RP07333 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
CSF1RP07333 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSF1RP07333 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CSF1RP07333 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1RP07333 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1RP07333 RBM22P2-201ENST00000393978 1814 ntBASIC16.56■□□□□ 0.24
CSF1RP07333 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CSF1RP07333 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1RP07333 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1RP07333 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1RP07333 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC16.56■□□□□ 0.24
CSF1RP07333 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1RP07333 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CSF1RP07333 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC16.56■□□□□ 0.24
CSF1RP07333 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1RP07333 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSF1RP07333 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CSF1RP07333 AL356653.1-201ENST00000402743 360 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms