Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC14.37□□□□□ -0.11
RB1P06400 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RB1P06400 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.36□□□□□ -0.11
RB1P06400 LINC00552-201ENST00000625151 2579 ntBASIC14.36□□□□□ -0.11
RB1P06400 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RB1P06400 AL031587.5-201ENST00000624344 1849 ntBASIC14.36□□□□□ -0.11
RB1P06400 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RB1P06400 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RB1P06400 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.36□□□□□ -0.11
RB1P06400 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.36□□□□□ -0.11
RB1P06400 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RB1P06400 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.36□□□□□ -0.11
RB1P06400 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RB1P06400 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.36□□□□□ -0.11
RB1P06400 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.36□□□□□ -0.11
RB1P06400 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RB1P06400 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 SNORD23-201ENST00000408876 110 ntBASIC14.36□□□□□ -0.11
RB1P06400 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.36□□□□□ -0.11
RB1P06400 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC14.36□□□□□ -0.11
RB1P06400 AC090820.1-201ENST00000519722 591 ntBASIC14.36□□□□□ -0.11
RB1P06400 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RB1P06400 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC14.36□□□□□ -0.11
RB1P06400 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC14.36□□□□□ -0.11
RB1P06400 AC091691.1-201ENST00000583587 1018 ntBASIC14.36□□□□□ -0.11
RB1P06400 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC14.36□□□□□ -0.11
RB1P06400 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC14.36□□□□□ -0.11
RB1P06400 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC14.36□□□□□ -0.11
RB1P06400 AL031768.1-201ENST00000606542 701 ntBASIC14.36□□□□□ -0.11
RB1P06400 AP000553.2-201ENST00000609038 441 ntBASIC14.36□□□□□ -0.11
RB1P06400 AC139100.2-201ENST00000616901 662 ntBASIC14.36□□□□□ -0.11
RB1P06400 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC14.36□□□□□ -0.11
RB1P06400 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC14.36□□□□□ -0.11
RB1P06400 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 AP001267.2-201ENST00000532619 2086 ntBASIC14.36□□□□□ -0.11
RB1P06400 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RB1P06400 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.36□□□□□ -0.11
RB1P06400 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.36□□□□□ -0.11
RB1P06400 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RB1P06400 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
RB1P06400 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RB1P06400 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RB1P06400 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.36□□□□□ -0.11
RB1P06400 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RB1P06400 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RB1P06400 AL009178.2-201ENST00000597278 2719 ntBASIC14.35□□□□□ -0.11
RB1P06400 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RB1P06400 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RB1P06400 AL031590.1-202ENST00000641466 1737 ntBASIC14.35□□□□□ -0.11
RB1P06400 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RB1P06400 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RB1P06400 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RB1P06400 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RB1P06400 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RB1P06400 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RB1P06400 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RB1P06400 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RB1P06400 PMF1-201ENST00000368273 884 ntTSL 2 BASIC14.35□□□□□ -0.11
RB1P06400 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RB1P06400 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC14.35□□□□□ -0.11
RB1P06400 GAPDHP29-201ENST00000429913 985 ntBASIC14.35□□□□□ -0.11
RB1P06400 AC093106.1-201ENST00000437271 352 ntBASIC14.35□□□□□ -0.11
RB1P06400 AC104115.1-201ENST00000484005 623 ntBASIC14.35□□□□□ -0.11
RB1P06400 FAM86JP-202ENST00000484500 988 ntBASIC14.35□□□□□ -0.11
RB1P06400 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC14.35□□□□□ -0.11
RB1P06400 AC114812.4-201ENST00000506676 757 ntBASIC14.35□□□□□ -0.11
RB1P06400 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RB1P06400 IGHVII-33-1-201ENST00000524010 280 ntBASIC14.35□□□□□ -0.11
RB1P06400 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC14.35□□□□□ -0.11
RB1P06400 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC14.35□□□□□ -0.11
RB1P06400 CDC37P2-201ENST00000562287 1029 ntBASIC14.35□□□□□ -0.11
RB1P06400 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC14.35□□□□□ -0.11
RB1P06400 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RB1P06400 AC112220.4-201ENST00000604982 1263 ntBASIC14.35□□□□□ -0.11
RB1P06400 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC14.35□□□□□ -0.11
RB1P06400 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC14.35□□□□□ -0.11
RB1P06400 AL109954.3-201ENST00000615088 558 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms