Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
CNOT4O95628 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CNOT4O95628 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CNOT4O95628 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.33□□□□□ -0.44
CNOT4O95628 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.33□□□□□ -0.44
CNOT4O95628 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.33□□□□□ -0.44
CNOT4O95628 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CNOT4O95628 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
CNOT4O95628 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CNOT4O95628 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.33□□□□□ -0.44
CNOT4O95628 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 OR2W2P-201ENST00000406313 909 ntBASIC12.33□□□□□ -0.44
CNOT4O95628 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 AC012362.1-201ENST00000434906 739 ntBASIC12.33□□□□□ -0.44
CNOT4O95628 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC12.33□□□□□ -0.44
CNOT4O95628 AC092638.2-201ENST00000441105 947 ntBASIC12.33□□□□□ -0.44
CNOT4O95628 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.33□□□□□ -0.44
CNOT4O95628 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.33□□□□□ -0.44
CNOT4O95628 PIN4P1-201ENST00000451079 396 ntBASIC12.33□□□□□ -0.44
CNOT4O95628 AC018463.1-201ENST00000456674 917 ntBASIC12.33□□□□□ -0.44
CNOT4O95628 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.33□□□□□ -0.44
CNOT4O95628 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.33□□□□□ -0.44
CNOT4O95628 AP003398.1-201ENST00000531124 318 ntBASIC12.33□□□□□ -0.44
CNOT4O95628 AP000911.2-201ENST00000534330 502 ntBASIC12.33□□□□□ -0.44
CNOT4O95628 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.33□□□□□ -0.44
CNOT4O95628 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC12.33□□□□□ -0.44
CNOT4O95628 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC12.33□□□□□ -0.44
CNOT4O95628 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.33□□□□□ -0.44
CNOT4O95628 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.33□□□□□ -0.44
CNOT4O95628 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.33□□□□□ -0.44
CNOT4O95628 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.33□□□□□ -0.44
CNOT4O95628 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.33□□□□□ -0.44
CNOT4O95628 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CNOT4O95628 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.33□□□□□ -0.44
CNOT4O95628 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.33□□□□□ -0.44
CNOT4O95628 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CNOT4O95628 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNOT4O95628 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CNOT4O95628 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CNOT4O95628 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.32□□□□□ -0.44
CNOT4O95628 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.32□□□□□ -0.44
CNOT4O95628 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CNOT4O95628 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.32□□□□□ -0.44
CNOT4O95628 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
CNOT4O95628 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CNOT4O95628 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.32□□□□□ -0.44
CNOT4O95628 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.32□□□□□ -0.44
CNOT4O95628 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CNOT4O95628 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.32□□□□□ -0.44
CNOT4O95628 AL354861.1-201ENST00000445213 355 ntBASIC12.32□□□□□ -0.44
CNOT4O95628 KRT18P66-201ENST00000452970 1269 ntBASIC12.32□□□□□ -0.44
CNOT4O95628 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.32□□□□□ -0.44
CNOT4O95628 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CNOT4O95628 PTK2-225ENST00000520892 571 ntTSL 4 BASIC12.32□□□□□ -0.44
CNOT4O95628 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.32□□□□□ -0.44
CNOT4O95628 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.32□□□□□ -0.44
CNOT4O95628 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.32□□□□□ -0.44
CNOT4O95628 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms