Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 AC011471.3-201ENST00000623576 402 ntBASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 AL451007.2-201ENST00000632004 563 ntBASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NPIPA3F8WFD2 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 AC072061.1-201ENST00000569710 2234 ntBASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 PRSS3P1-201ENST00000503996 742 ntBASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 REEP5-205ENST00000504247 480 ntTSL 5 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 AC100858.1-201ENST00000514059 1228 ntBASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 IGHV1-12-201ENST00000518307 205 ntBASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 AC006158.1-201ENST00000610661 249 ntBASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPA3F8WFD2 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 AL365181.3-201ENST00000605886 3222 ntBASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms