Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 AC079781.5-202ENST00000641784 3743 ntBASIC12.12□□□□□ -0.47
NPIPB4C9JG80 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 HNRNPA1P33-201ENST00000421426 561 ntBASIC12.12□□□□□ -0.47
NPIPB4C9JG80 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 AC041040.1-201ENST00000425197 460 ntBASIC12.12□□□□□ -0.47
NPIPB4C9JG80 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 IGHV1-12-201ENST00000518307 205 ntBASIC12.12□□□□□ -0.47
NPIPB4C9JG80 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 AL132994.1-201ENST00000554098 400 ntBASIC12.12□□□□□ -0.47
NPIPB4C9JG80 CHMP4BP1-201ENST00000556017 588 ntBASIC12.12□□□□□ -0.47
NPIPB4C9JG80 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 AC007718.1-201ENST00000621078 280 ntBASIC12.12□□□□□ -0.47
NPIPB4C9JG80 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 MEX3B-202ENST00000558133 4333 ntBASIC12.12□□□□□ -0.47
NPIPB4C9JG80 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 PTENP1-202ENST00000532280 3996 ntBASIC12.12□□□□□ -0.47
NPIPB4C9JG80 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 PCDHA6-201ENST00000378126 3267 ntBASIC12.12□□□□□ -0.47
NPIPB4C9JG80 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 KRT8P42-201ENST00000405771 1399 ntBASIC12.11□□□□□ -0.47
NPIPB4C9JG80 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 AL512430.1-201ENST00000392575 860 ntBASIC12.11□□□□□ -0.47
NPIPB4C9JG80 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 AC103810.10-201ENST00000606504 343 ntBASIC12.11□□□□□ -0.47
NPIPB4C9JG80 AC092171.5-201ENST00000608012 942 ntBASIC12.11□□□□□ -0.47
NPIPB4C9JG80 AC007250.1-201ENST00000608934 338 ntBASIC12.11□□□□□ -0.47
NPIPB4C9JG80 AC026120.2-201ENST00000617239 309 ntBASIC12.11□□□□□ -0.47
NPIPB4C9JG80 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPB4C9JG80 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms