Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 AC027612.1-201ENST00000445234 2395 ntBASIC14.22□□□□□ -0.13
HDAC11Q96DB2 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.22□□□□□ -0.13
HDAC11Q96DB2 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 MIR4265-201ENST00000582152 99 ntBASIC14.22□□□□□ -0.13
HDAC11Q96DB2 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 AC091812.3-201ENST00000621362 345 ntBASIC14.22□□□□□ -0.13
HDAC11Q96DB2 CU633904.3-201ENST00000624042 1029 ntBASIC14.22□□□□□ -0.13
HDAC11Q96DB2 AC068587.10-201ENST00000641210 219 ntBASIC14.22□□□□□ -0.13
HDAC11Q96DB2 TP73-203ENST00000357733 4899 ntTSL 5 BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 RCC2P5-201ENST00000492126 1487 ntBASIC14.22□□□□□ -0.13
HDAC11Q96DB2 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 AC040160.2-201ENST00000623816 1675 ntBASIC14.22□□□□□ -0.13
HDAC11Q96DB2 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC11Q96DB2 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.22□□□□□ -0.13
HDAC11Q96DB2 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 AC007274.2-201ENST00000421675 662 ntBASIC14.21□□□□□ -0.13
HDAC11Q96DB2 RPL8P2-201ENST00000430538 502 ntBASIC14.21□□□□□ -0.13
HDAC11Q96DB2 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 AL133466.1-201ENST00000447582 150 ntBASIC14.21□□□□□ -0.13
HDAC11Q96DB2 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 MIR4326-201ENST00000582203 59 ntBASIC14.21□□□□□ -0.13
HDAC11Q96DB2 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 AC012044.1-201ENST00000603431 297 ntBASIC14.21□□□□□ -0.13
HDAC11Q96DB2 AL031673.1-201ENST00000611460 466 ntBASIC14.21□□□□□ -0.13
HDAC11Q96DB2 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.21□□□□□ -0.13
HDAC11Q96DB2 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.21□□□□□ -0.14
HDAC11Q96DB2 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDAC11Q96DB2 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
HDAC11Q96DB2 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDAC11Q96DB2 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.21□□□□□ -0.14
HDAC11Q96DB2 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDAC11Q96DB2 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HDAC11Q96DB2 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDAC11Q96DB2 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDAC11Q96DB2 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.21□□□□□ -0.14
HDAC11Q96DB2 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDAC11Q96DB2 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDAC11Q96DB2 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.2□□□□□ -0.14
HDAC11Q96DB2 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 MKRN5P-201ENST00000445263 1467 ntBASIC14.2□□□□□ -0.14
HDAC11Q96DB2 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDAC11Q96DB2 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms