Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 AC008620.2-201ENST00000510294 1569 ntBASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 AC234644.1-201ENST00000406065 370 ntBASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 GULOP-201ENST00000454030 748 ntBASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 AC092862.1-201ENST00000541534 533 ntBASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 AL359219.1-201ENST00000556311 934 ntBASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 MIR8071-1-201ENST00000616769 65 ntBASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 MIR8071-2-201ENST00000616772 65 ntBASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 AC073869.4-201ENST00000620841 800 ntBASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 AP000769.1-203ENST00000637245 208 ntBASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 AL139424.3-202ENST00000641619 917 ntBASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 AL139385.1-201ENST00000611744 3272 ntBASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 AC092115.1-201ENST00000566277 1402 ntBASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 AC087203.1-201ENST00000532111 1181 ntBASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 FKBP4P8-201ENST00000610931 1369 ntBASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 Z98885.3-201ENST00000624882 1757 ntBASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms