Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 DPM3-202ENST00000368399 517 ntBASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 SLC25A15P3-201ENST00000505530 290 ntBASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 RN7SL455P-201ENST00000580629 282 ntBASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 AL157813.1-201ENST00000612996 587 ntBASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 AC090114.2-201ENST00000608477 7054 ntBASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
VPS37AQ8NEZ2 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 AC008040.5-201ENST00000599781 1781 ntBASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 AC005034.1-201ENST00000426657 489 ntBASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 GOLGA2P4-201ENST00000441462 777 ntBASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 AC005740.1-201ENST00000515639 522 ntBASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 KRT8P1-201ENST00000557533 1207 ntBASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 AC013355.1-201ENST00000562625 723 ntBASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 AC021517.1-202ENST00000585897 2111 ntTSL 5 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS37AQ8NEZ2 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms