Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CSNK1DP48730 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC13.7□□□□□ -0.22
CSNK1DP48730 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
CSNK1DP48730 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.7□□□□□ -0.22
CSNK1DP48730 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 STK16-203ENST00000409516 895 ntTSL 2 BASIC13.7□□□□□ -0.22
CSNK1DP48730 AP000244.1-201ENST00000424582 201 ntBASIC13.7□□□□□ -0.22
CSNK1DP48730 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC13.7□□□□□ -0.22
CSNK1DP48730 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CSNK1DP48730 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.7□□□□□ -0.22
CSNK1DP48730 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.7□□□□□ -0.22
CSNK1DP48730 AL359219.1-201ENST00000556311 934 ntBASIC13.7□□□□□ -0.22
CSNK1DP48730 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.7□□□□□ -0.22
CSNK1DP48730 RN7SL134P-201ENST00000579756 303 ntBASIC13.7□□□□□ -0.22
CSNK1DP48730 MIR4472-1-201ENST00000584349 80 ntBASIC13.7□□□□□ -0.22
CSNK1DP48730 AC011247.3-201ENST00000603297 438 ntBASIC13.7□□□□□ -0.22
CSNK1DP48730 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CSNK1DP48730 AL591926.3-201ENST00000611630 238 ntBASIC13.7□□□□□ -0.22
CSNK1DP48730 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CSNK1DP48730 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CSNK1DP48730 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.7□□□□□ -0.22
CSNK1DP48730 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 HNRNPLP1-201ENST00000421896 1501 ntBASIC13.69□□□□□ -0.22
CSNK1DP48730 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC13.69□□□□□ -0.22
CSNK1DP48730 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.69□□□□□ -0.22
CSNK1DP48730 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CSNK1DP48730 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.69□□□□□ -0.22
CSNK1DP48730 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CSNK1DP48730 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.69□□□□□ -0.22
CSNK1DP48730 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
CSNK1DP48730 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CSNK1DP48730 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.69□□□□□ -0.22
CSNK1DP48730 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CSNK1DP48730 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC13.69□□□□□ -0.22
CSNK1DP48730 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC13.69□□□□□ -0.22
CSNK1DP48730 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC13.69□□□□□ -0.22
CSNK1DP48730 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC13.69□□□□□ -0.22
CSNK1DP48730 BCAS2P2-201ENST00000425064 674 ntBASIC13.69□□□□□ -0.22
CSNK1DP48730 GCSHP3-201ENST00000431120 391 ntBASIC13.69□□□□□ -0.22
CSNK1DP48730 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.69□□□□□ -0.22
CSNK1DP48730 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC13.69□□□□□ -0.22
CSNK1DP48730 RN7SL351P-201ENST00000469306 248 ntBASIC13.69□□□□□ -0.22
CSNK1DP48730 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 AC090136.2-201ENST00000517809 420 ntBASIC13.69□□□□□ -0.22
CSNK1DP48730 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC13.69□□□□□ -0.22
CSNK1DP48730 FAM187B2P-201ENST00000577135 713 ntBASIC13.69□□□□□ -0.22
CSNK1DP48730 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC13.69□□□□□ -0.22
CSNK1DP48730 U62317.3-201ENST00000608319 855 ntBASIC13.69□□□□□ -0.22
CSNK1DP48730 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC13.69□□□□□ -0.22
CSNK1DP48730 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CSNK1DP48730 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC13.69□□□□□ -0.22
CSNK1DP48730 MIR6746-201ENST00000620971 63 ntBASIC13.69□□□□□ -0.22
CSNK1DP48730 AL451007.2-201ENST00000632004 563 ntBASIC13.69□□□□□ -0.22
CSNK1DP48730 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CSNK1DP48730 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CSNK1DP48730 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CSNK1DP48730 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 AC012531.1-201ENST00000562848 2680 ntBASIC13.69□□□□□ -0.22
CSNK1DP48730 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CSNK1DP48730 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1DP48730 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms