Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.35□□□□□ -0.11
MMP13P45452 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.35□□□□□ -0.11
MMP13P45452 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP13P45452 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.35□□□□□ -0.11
MMP13P45452 AC114947.1-202ENST00000514136 344 ntBASIC14.35□□□□□ -0.11
MMP13P45452 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 RTN3P1-201ENST00000536295 711 ntBASIC14.35□□□□□ -0.11
MMP13P45452 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
MMP13P45452 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.35□□□□□ -0.11
MMP13P45452 NDUFB10P1-201ENST00000567319 521 ntBASIC14.35□□□□□ -0.11
MMP13P45452 AC026803.1-201ENST00000569130 274 ntBASIC14.35□□□□□ -0.11
MMP13P45452 RN7SL574P-201ENST00000581512 297 ntBASIC14.35□□□□□ -0.11
MMP13P45452 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.35□□□□□ -0.11
MMP13P45452 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.35□□□□□ -0.11
MMP13P45452 AC079336.7-201ENST00000623428 1078 ntBASIC14.35□□□□□ -0.11
MMP13P45452 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
MMP13P45452 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP13P45452 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP13P45452 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MMP13P45452 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.34□□□□□ -0.11
MMP13P45452 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC14.34□□□□□ -0.11
MMP13P45452 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.34□□□□□ -0.11
MMP13P45452 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
MMP13P45452 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.34□□□□□ -0.11
MMP13P45452 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MMP13P45452 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.34□□□□□ -0.11
MMP13P45452 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.34□□□□□ -0.11
MMP13P45452 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.34□□□□□ -0.11
MMP13P45452 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.34□□□□□ -0.11
MMP13P45452 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 MIR645-201ENST00000385283 94 ntBASIC14.34□□□□□ -0.11
MMP13P45452 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.34□□□□□ -0.11
MMP13P45452 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.34□□□□□ -0.11
MMP13P45452 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.34□□□□□ -0.11
MMP13P45452 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
MMP13P45452 SLC25A15P3-201ENST00000505530 290 ntBASIC14.34□□□□□ -0.11
MMP13P45452 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MMP13P45452 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.34□□□□□ -0.11
MMP13P45452 AC242376.1-201ENST00000559033 726 ntBASIC14.34□□□□□ -0.11
MMP13P45452 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.34□□□□□ -0.11
MMP13P45452 AL353770.1-201ENST00000614915 403 ntBASIC14.34□□□□□ -0.11
MMP13P45452 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MMP13P45452 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MMP13P45452 MARK2P16-201ENST00000605714 1723 ntBASIC14.34□□□□□ -0.11
MMP13P45452 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MMP13P45452 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC14.34□□□□□ -0.11
MMP13P45452 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.34□□□□□ -0.11
MMP13P45452 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP13P45452 FAM90A2P-201ENST00000511144 1395 ntBASIC14.34□□□□□ -0.11
MMP13P45452 FAM90A25P-201ENST00000528404 1395 ntBASIC14.34□□□□□ -0.11
MMP13P45452 LINC00638-201ENST00000555578 2518 ntBASIC14.34□□□□□ -0.11
MMP13P45452 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MMP13P45452 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
MMP13P45452 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MMP13P45452 PCDHB17P-202ENST00000623466 3066 ntBASIC14.33□□□□□ -0.11
MMP13P45452 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
MMP13P45452 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
MMP13P45452 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC14.33□□□□□ -0.12
MMP13P45452 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.33□□□□□ -0.12
MMP13P45452 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms