Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
MTHFRP42898 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.37□□□□□ -0.11
MTHFRP42898 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
MTHFRP42898 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.37□□□□□ -0.11
MTHFRP42898 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.37□□□□□ -0.11
MTHFRP42898 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MTHFRP42898 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.37□□□□□ -0.11
MTHFRP42898 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 AC005252.3-201ENST00000623855 2258 ntBASIC14.36□□□□□ -0.11
MTHFRP42898 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
MTHFRP42898 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.36□□□□□ -0.11
MTHFRP42898 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 SNX15-201ENST00000352068 771 ntTSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC14.36□□□□□ -0.11
MTHFRP42898 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 MED15P3-201ENST00000413613 326 ntBASIC14.36□□□□□ -0.11
MTHFRP42898 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC14.36□□□□□ -0.11
MTHFRP42898 AL359092.2-201ENST00000423330 585 ntBASIC14.36□□□□□ -0.11
MTHFRP42898 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC14.36□□□□□ -0.11
MTHFRP42898 PEBP1P3-201ENST00000455475 548 ntBASIC14.36□□□□□ -0.11
MTHFRP42898 RNU1-80P-201ENST00000459500 161 ntBASIC14.36□□□□□ -0.11
MTHFRP42898 ALG1L15P-201ENST00000482834 794 ntBASIC14.36□□□□□ -0.11
MTHFRP42898 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC14.36□□□□□ -0.11
MTHFRP42898 AC008494.1-201ENST00000497612 796 ntBASIC14.36□□□□□ -0.11
MTHFRP42898 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC14.36□□□□□ -0.11
MTHFRP42898 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC14.36□□□□□ -0.11
MTHFRP42898 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC14.36□□□□□ -0.11
MTHFRP42898 AC132812.1-201ENST00000583145 892 ntBASIC14.36□□□□□ -0.11
MTHFRP42898 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.36□□□□□ -0.11
MTHFRP42898 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC14.36□□□□□ -0.11
MTHFRP42898 KF455155.1-201ENST00000604493 303 ntBASIC14.36□□□□□ -0.11
MTHFRP42898 AC026120.2-201ENST00000617239 309 ntBASIC14.36□□□□□ -0.11
MTHFRP42898 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 AC245369.7-201ENST00000631386 350 ntBASIC14.36□□□□□ -0.11
MTHFRP42898 AL139424.3-202ENST00000641619 917 ntBASIC14.36□□□□□ -0.11
MTHFRP42898 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.36□□□□□ -0.11
MTHFRP42898 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MTHFRP42898 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.36□□□□□ -0.11
MTHFRP42898 AC090505.1-201ENST00000430515 1834 ntBASIC14.36□□□□□ -0.11
MTHFRP42898 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.36□□□□□ -0.11
MTHFRP42898 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MTHFRP42898 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MTHFRP42898 AC064850.1-201ENST00000413279 1398 ntBASIC14.35□□□□□ -0.11
MTHFRP42898 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC14.35□□□□□ -0.11
MTHFRP42898 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.35□□□□□ -0.11
MTHFRP42898 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
MTHFRP42898 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 GUCY2EP-203ENST00000531117 1918 ntBASIC14.35□□□□□ -0.11
MTHFRP42898 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
MTHFRP42898 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.35□□□□□ -0.11
MTHFRP42898 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MTHFRP42898 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
MTHFRP42898 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.35□□□□□ -0.11
MTHFRP42898 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
MTHFRP42898 CCL19-202ENST00000378800 414 ntTSL 2 BASIC14.35□□□□□ -0.11
MTHFRP42898 MIR611-201ENST00000384869 67 ntBASIC14.35□□□□□ -0.11
MTHFRP42898 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms