Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.74■□□□□ 0.11
CLCN1P35523 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.74■□□□□ 0.11
CLCN1P35523 SLC4A9-201ENST00000432095 3086 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLCN1P35523 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLCN1P35523 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 LINC01561-201ENST00000369071 2176 ntBASIC15.73■□□□□ 0.11
CLCN1P35523 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC15.73■□□□□ 0.11
CLCN1P35523 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 SLC16A7-203ENST00000547379 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 ZNF674-201ENST00000414387 2274 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
CLCN1P35523 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 ATF4P4-201ENST00000393544 1930 ntBASIC15.73■□□□□ 0.11
CLCN1P35523 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCN1P35523 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLCN1P35523 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CLCN1P35523 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CLCN1P35523 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCN1P35523 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLCN1P35523 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.73■□□□□ 0.11
CLCN1P35523 SSR4P1-201ENST00000415143 412 ntBASIC15.73■□□□□ 0.11
CLCN1P35523 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCN1P35523 KRT43P-201ENST00000434019 910 ntBASIC15.73■□□□□ 0.11
CLCN1P35523 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CLCN1P35523 RPL7P3-201ENST00000441388 714 ntBASIC15.73■□□□□ 0.11
CLCN1P35523 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.73■□□□□ 0.11
CLCN1P35523 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CLCN1P35523 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.73■□□□□ 0.11
CLCN1P35523 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCN1P35523 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.73■□□□□ 0.11
CLCN1P35523 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLCN1P35523 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCN1P35523 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC15.73■□□□□ 0.11
CLCN1P35523 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.73■□□□□ 0.11
CLCN1P35523 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.73■□□□□ 0.11
CLCN1P35523 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.73■□□□□ 0.11
CLCN1P35523 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCN1P35523 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLCN1P35523 KRT8P28-201ENST00000433288 1390 ntBASIC15.73■□□□□ 0.11
CLCN1P35523 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CLCN1P35523 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CLCN1P35523 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
CLCN1P35523 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN1P35523 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN1P35523 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN1P35523 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN1P35523 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCN1P35523 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN1P35523 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN1P35523 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN1P35523 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN1P35523 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLCN1P35523 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN1P35523 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN1P35523 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN1P35523 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLCN1P35523 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.72■□□□□ 0.11
CLCN1P35523 AL136309.1-201ENST00000403917 691 ntBASIC15.72■□□□□ 0.11
CLCN1P35523 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.72■□□□□ 0.11
CLCN1P35523 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.72■□□□□ 0.11
CLCN1P35523 CHMP1AP1-201ENST00000445563 662 ntBASIC15.72■□□□□ 0.11
CLCN1P35523 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.72■□□□□ 0.11
CLCN1P35523 GAPDHP21-201ENST00000450301 1010 ntBASIC15.72■□□□□ 0.11
CLCN1P35523 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CLCN1P35523 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.72■□□□□ 0.11
CLCN1P35523 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.72■□□□□ 0.11
CLCN1P35523 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.72■□□□□ 0.11
CLCN1P35523 AC106886.1-201ENST00000568660 600 ntBASIC15.72■□□□□ 0.11
CLCN1P35523 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLCN1P35523 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC15.72■□□□□ 0.11
CLCN1P35523 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.72■□□□□ 0.11
CLCN1P35523 RHOXF1P1-202ENST00000635473 501 ntBASIC15.72■□□□□ 0.11
CLCN1P35523 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLCN1P35523 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN1P35523 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCN1P35523 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLCN1P35523 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN1P35523 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLCN1P35523 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN1P35523 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCN1P35523 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN1P35523 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN1P35523 KRT8P4-201ENST00000509735 1454 ntBASIC15.71■□□□□ 0.11
CLCN1P35523 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms