Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
S4R3C0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.53■□□□□ 0.4
S4R3C0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.53■□□□□ 0.4
S4R3C0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
S4R3C0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
S4R3C0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
S4R3C0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
S4R3C0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
S4R3C0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
S4R3C0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
S4R3C0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
S4R3C0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
S4R3C0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
S4R3C0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
S4R3C0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.52■□□□□ 0.4
S4R3C0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.52■□□□□ 0.4
S4R3C0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
S4R3C0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
S4R3C0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
S4R3C0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
S4R3C0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
S4R3C0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
S4R3C0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
S4R3C0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
S4R3C0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
S4R3C0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
S4R3C0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.52■□□□□ 0.39
S4R3C0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
S4R3C0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
S4R3C0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
S4R3C0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
S4R3C0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.52■□□□□ 0.39
S4R3C0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
S4R3C0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.51■□□□□ 0.39
S4R3C0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
S4R3C0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
S4R3C0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
S4R3C0 KRT16P3-201ENST00000439127 1283 ntBASIC17.51■□□□□ 0.39
S4R3C0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
S4R3C0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.51■□□□□ 0.39
S4R3C0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
S4R3C0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.51■□□□□ 0.39
S4R3C0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.51■□□□□ 0.39
S4R3C0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
S4R3C0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
S4R3C0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
S4R3C0 C1orf229-201ENST00000623686 2258 ntBASIC17.51■□□□□ 0.39
S4R3C0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
S4R3C0 AL353803.4-201ENST00000565882 1934 ntBASIC17.51■□□□□ 0.39
S4R3C0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
S4R3C0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
S4R3C0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
S4R3C0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
S4R3C0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.5■□□□□ 0.39
S4R3C0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
S4R3C0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
S4R3C0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
S4R3C0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.5■□□□□ 0.39
S4R3C0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.5■□□□□ 0.39
S4R3C0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.5■□□□□ 0.39
S4R3C0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
S4R3C0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
S4R3C0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
S4R3C0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
S4R3C0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.5■□□□□ 0.39
S4R3C0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
S4R3C0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
S4R3C0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
S4R3C0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
S4R3C0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
S4R3C0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
S4R3C0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
S4R3C0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.49■□□□□ 0.39
S4R3C0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
S4R3C0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
S4R3C0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
S4R3C0 GUSBP5-201ENST00000418136 578 ntBASIC17.49■□□□□ 0.39
S4R3C0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.49■□□□□ 0.39
S4R3C0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
S4R3C0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.49■□□□□ 0.39
S4R3C0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
S4R3C0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
S4R3C0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
S4R3C0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.48■□□□□ 0.39
S4R3C0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
S4R3C0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
S4R3C0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
S4R3C0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
S4R3C0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.48■□□□□ 0.39
S4R3C0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
S4R3C0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.48■□□□□ 0.39
S4R3C0 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.48■□□□□ 0.39
S4R3C0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
S4R3C0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
S4R3C0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
S4R3C0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
S4R3C0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
S4R3C0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
S4R3C0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
S4R3C0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms