Protein–RNA interactions for Protein: Q9Y6Q9

NCOA3, Nuclear receptor coactivator 3, humanhuman

Predictions only

Length 1,424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA3Q9Y6Q9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NCOA3Q9Y6Q9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
NCOA3Q9Y6Q9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.42■■■□□ 2.62
NCOA3Q9Y6Q9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
NCOA3Q9Y6Q9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
NCOA3Q9Y6Q9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NCOA3Q9Y6Q9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC31.41■■■□□ 2.62
NCOA3Q9Y6Q9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NCOA3Q9Y6Q9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
NCOA3Q9Y6Q9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
NCOA3Q9Y6Q9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC31.41■■■□□ 2.62
NCOA3Q9Y6Q9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
NCOA3Q9Y6Q9 ALDH1A3-203ENST00000557963 1670 ntBASIC31.4■■■□□ 2.62
NCOA3Q9Y6Q9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
NCOA3Q9Y6Q9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NCOA3Q9Y6Q9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.4■■■□□ 2.62
NCOA3Q9Y6Q9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NCOA3Q9Y6Q9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NCOA3Q9Y6Q9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
NCOA3Q9Y6Q9 CD99P1-205ENST00000527459 561 ntBASIC31.4■■■□□ 2.62
NCOA3Q9Y6Q9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NCOA3Q9Y6Q9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
NCOA3Q9Y6Q9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
NCOA3Q9Y6Q9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.39■■■□□ 2.62
NCOA3Q9Y6Q9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC31.39■■■□□ 2.62
NCOA3Q9Y6Q9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC31.39■■■□□ 2.62
NCOA3Q9Y6Q9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
NCOA3Q9Y6Q9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
NCOA3Q9Y6Q9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
NCOA3Q9Y6Q9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC31.38■■■□□ 2.61
NCOA3Q9Y6Q9 AC004854.2-201ENST00000608450 1441 ntBASIC31.38■■■□□ 2.61
NCOA3Q9Y6Q9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC31.38■■■□□ 2.61
NCOA3Q9Y6Q9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NCOA3Q9Y6Q9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
NCOA3Q9Y6Q9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
NCOA3Q9Y6Q9 COX20-201ENST00000366528 568 ntTSL 2 BASIC31.37■■■□□ 2.61
NCOA3Q9Y6Q9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
NCOA3Q9Y6Q9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
NCOA3Q9Y6Q9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC31.36■■■□□ 2.61
NCOA3Q9Y6Q9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC31.36■■■□□ 2.61
NCOA3Q9Y6Q9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC31.36■■■□□ 2.61
NCOA3Q9Y6Q9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC31.36■■■□□ 2.61
NCOA3Q9Y6Q9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
NCOA3Q9Y6Q9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.36■■■□□ 2.61
NCOA3Q9Y6Q9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NCOA3Q9Y6Q9 MIR663A-201ENST00000385250 93 ntBASIC31.35■■■□□ 2.61
NCOA3Q9Y6Q9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
NCOA3Q9Y6Q9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NCOA3Q9Y6Q9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NCOA3Q9Y6Q9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
NCOA3Q9Y6Q9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.34■■■□□ 2.61
NCOA3Q9Y6Q9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NCOA3Q9Y6Q9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
NCOA3Q9Y6Q9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
NCOA3Q9Y6Q9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
NCOA3Q9Y6Q9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC31.33■■■□□ 2.61
NCOA3Q9Y6Q9 GPX1P1-201ENST00000388829 606 ntBASIC31.33■■■□□ 2.61
NCOA3Q9Y6Q9 KRT19P1-201ENST00000405746 1186 ntBASIC31.33■■■□□ 2.61
NCOA3Q9Y6Q9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC31.33■■■□□ 2.61
NCOA3Q9Y6Q9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
NCOA3Q9Y6Q9 KRT18P11-201ENST00000435214 1283 ntBASIC31.33■■■□□ 2.61
NCOA3Q9Y6Q9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC31.33■■■□□ 2.61
NCOA3Q9Y6Q9 DUX4L4-201ENST00000566884 1269 ntBASIC31.33■■■□□ 2.61
NCOA3Q9Y6Q9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
NCOA3Q9Y6Q9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NCOA3Q9Y6Q9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.33■■■□□ 2.61
NCOA3Q9Y6Q9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.61
NCOA3Q9Y6Q9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
NCOA3Q9Y6Q9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC31.32■■■□□ 2.61
NCOA3Q9Y6Q9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC31.32■■■□□ 2.61
NCOA3Q9Y6Q9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
NCOA3Q9Y6Q9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
NCOA3Q9Y6Q9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC31.32■■■□□ 2.6
NCOA3Q9Y6Q9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC31.32■■■□□ 2.6
NCOA3Q9Y6Q9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
NCOA3Q9Y6Q9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
NCOA3Q9Y6Q9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC31.32■■■□□ 2.6
NCOA3Q9Y6Q9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC31.32■■■□□ 2.6
NCOA3Q9Y6Q9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
NCOA3Q9Y6Q9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
NCOA3Q9Y6Q9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NCOA3Q9Y6Q9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
NCOA3Q9Y6Q9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NCOA3Q9Y6Q9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC31.31■■■□□ 2.6
NCOA3Q9Y6Q9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC31.31■■■□□ 2.6
NCOA3Q9Y6Q9 FP325331.1-202ENST00000623531 1380 ntBASIC31.3■■■□□ 2.6
NCOA3Q9Y6Q9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
NCOA3Q9Y6Q9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
NCOA3Q9Y6Q9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
NCOA3Q9Y6Q9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC31.3■■■□□ 2.6
NCOA3Q9Y6Q9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC31.3■■■□□ 2.6
NCOA3Q9Y6Q9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
NCOA3Q9Y6Q9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NCOA3Q9Y6Q9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NCOA3Q9Y6Q9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
NCOA3Q9Y6Q9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
NCOA3Q9Y6Q9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC31.29■■■□□ 2.6
NCOA3Q9Y6Q9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
NCOA3Q9Y6Q9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
NCOA3Q9Y6Q9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC31.29■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms