Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.53■■□□□ 1.68
PTCH2Q9Y6C5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PTCH2Q9Y6C5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.53■■□□□ 1.68
PTCH2Q9Y6C5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PTCH2Q9Y6C5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC25.53■■□□□ 1.68
PTCH2Q9Y6C5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC25.53■■□□□ 1.68
PTCH2Q9Y6C5 MIR6089-201ENST00000616698 64 ntBASIC25.53■■□□□ 1.68
PTCH2Q9Y6C5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
PTCH2Q9Y6C5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PTCH2Q9Y6C5 AC004854.2-201ENST00000608450 1441 ntBASIC25.53■■□□□ 1.68
PTCH2Q9Y6C5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
PTCH2Q9Y6C5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.53■■□□□ 1.68
PTCH2Q9Y6C5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCH2Q9Y6C5 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PTCH2Q9Y6C5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCH2Q9Y6C5 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCH2Q9Y6C5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.52■■□□□ 1.68
PTCH2Q9Y6C5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCH2Q9Y6C5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC25.52■■□□□ 1.68
PTCH2Q9Y6C5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
PTCH2Q9Y6C5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCH2Q9Y6C5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PTCH2Q9Y6C5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCH2Q9Y6C5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCH2Q9Y6C5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
PTCH2Q9Y6C5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
PTCH2Q9Y6C5 GPX1P1-201ENST00000388829 606 ntBASIC25.51■■□□□ 1.67
PTCH2Q9Y6C5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC25.51■■□□□ 1.67
PTCH2Q9Y6C5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.51■■□□□ 1.67
PTCH2Q9Y6C5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
PTCH2Q9Y6C5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PTCH2Q9Y6C5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PTCH2Q9Y6C5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.51■■□□□ 1.67
PTCH2Q9Y6C5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PTCH2Q9Y6C5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PTCH2Q9Y6C5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PTCH2Q9Y6C5 SLC6A10P-202ENST00000431994 2058 ntBASIC25.5■■□□□ 1.67
PTCH2Q9Y6C5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PTCH2Q9Y6C5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
PTCH2Q9Y6C5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC25.49■■□□□ 1.67
PTCH2Q9Y6C5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
PTCH2Q9Y6C5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PTCH2Q9Y6C5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PTCH2Q9Y6C5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PTCH2Q9Y6C5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
PTCH2Q9Y6C5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.49■■□□□ 1.67
PTCH2Q9Y6C5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.49■■□□□ 1.67
PTCH2Q9Y6C5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.49■■□□□ 1.67
PTCH2Q9Y6C5 TPRG1LP1-201ENST00000598702 760 ntBASIC25.49■■□□□ 1.67
PTCH2Q9Y6C5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PTCH2Q9Y6C5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
PTCH2Q9Y6C5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PTCH2Q9Y6C5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PTCH2Q9Y6C5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
PTCH2Q9Y6C5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.48■■□□□ 1.67
PTCH2Q9Y6C5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
PTCH2Q9Y6C5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC25.48■■□□□ 1.67
PTCH2Q9Y6C5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC25.48■■□□□ 1.67
PTCH2Q9Y6C5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC25.48■■□□□ 1.67
PTCH2Q9Y6C5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
PTCH2Q9Y6C5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PTCH2Q9Y6C5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PTCH2Q9Y6C5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PTCH2Q9Y6C5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PTCH2Q9Y6C5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PTCH2Q9Y6C5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
PTCH2Q9Y6C5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PTCH2Q9Y6C5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.47■■□□□ 1.67
PTCH2Q9Y6C5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PTCH2Q9Y6C5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.47■■□□□ 1.67
PTCH2Q9Y6C5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PTCH2Q9Y6C5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
PTCH2Q9Y6C5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
PTCH2Q9Y6C5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC25.46■■□□□ 1.67
PTCH2Q9Y6C5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.46■■□□□ 1.67
PTCH2Q9Y6C5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PTCH2Q9Y6C5 AC011767.1-201ENST00000617410 1153 ntBASIC25.46■■□□□ 1.67
PTCH2Q9Y6C5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.46■■□□□ 1.67
PTCH2Q9Y6C5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC25.46■■□□□ 1.67
PTCH2Q9Y6C5 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PTCH2Q9Y6C5 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.45■■□□□ 1.67
PTCH2Q9Y6C5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PTCH2Q9Y6C5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.45■■□□□ 1.66
PTCH2Q9Y6C5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PTCH2Q9Y6C5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
PTCH2Q9Y6C5 AC142086.2-201ENST00000569753 217 ntBASIC25.45■■□□□ 1.66
PTCH2Q9Y6C5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
PTCH2Q9Y6C5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PTCH2Q9Y6C5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PTCH2Q9Y6C5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.45■■□□□ 1.66
PTCH2Q9Y6C5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
PTCH2Q9Y6C5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.44■■□□□ 1.66
PTCH2Q9Y6C5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PTCH2Q9Y6C5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
PTCH2Q9Y6C5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC25.44■■□□□ 1.66
PTCH2Q9Y6C5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.43■■□□□ 1.66
PTCH2Q9Y6C5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PTCH2Q9Y6C5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.43■■□□□ 1.66
PTCH2Q9Y6C5 DUX4L4-201ENST00000566884 1269 ntBASIC25.43■■□□□ 1.66
PTCH2Q9Y6C5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms