Protein–RNA interactions for Protein: Q9UQQ2

SH2B3, SH2B adapter protein 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3Q9UQQ2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.58■■□□□ 1.04
SH2B3Q9UQQ2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
SH2B3Q9UQQ2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH2B3Q9UQQ2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SH2B3Q9UQQ2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH2B3Q9UQQ2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SH2B3Q9UQQ2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SH2B3Q9UQQ2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH2B3Q9UQQ2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH2B3Q9UQQ2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.57■■□□□ 1.04
SH2B3Q9UQQ2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SH2B3Q9UQQ2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SH2B3Q9UQQ2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
SH2B3Q9UQQ2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.56■■□□□ 1.04
SH2B3Q9UQQ2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.56■■□□□ 1.04
SH2B3Q9UQQ2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH2B3Q9UQQ2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.56■■□□□ 1.04
SH2B3Q9UQQ2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SH2B3Q9UQQ2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH2B3Q9UQQ2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SH2B3Q9UQQ2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.55■■□□□ 1.04
SH2B3Q9UQQ2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SH2B3Q9UQQ2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH2B3Q9UQQ2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SH2B3Q9UQQ2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH2B3Q9UQQ2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SH2B3Q9UQQ2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH2B3Q9UQQ2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH2B3Q9UQQ2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.53■■□□□ 1.04
SH2B3Q9UQQ2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SH2B3Q9UQQ2 AC006455.2-201ENST00000429931 906 ntBASIC21.53■■□□□ 1.04
SH2B3Q9UQQ2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.53■■□□□ 1.04
SH2B3Q9UQQ2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.53■■□□□ 1.04
SH2B3Q9UQQ2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SH2B3Q9UQQ2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.52■■□□□ 1.04
SH2B3Q9UQQ2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SH2B3Q9UQQ2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.52■■□□□ 1.04
SH2B3Q9UQQ2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH2B3Q9UQQ2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SH2B3Q9UQQ2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH2B3Q9UQQ2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH2B3Q9UQQ2 AC068473.5-201ENST00000616428 2072 ntBASIC21.52■■□□□ 1.04
SH2B3Q9UQQ2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.52■■□□□ 1.04
SH2B3Q9UQQ2 LINC01529-204ENST00000636474 1715 ntBASIC21.52■■□□□ 1.03
SH2B3Q9UQQ2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.52■■□□□ 1.03
SH2B3Q9UQQ2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SH2B3Q9UQQ2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH2B3Q9UQQ2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SH2B3Q9UQQ2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.51■■□□□ 1.03
SH2B3Q9UQQ2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH2B3Q9UQQ2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH2B3Q9UQQ2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH2B3Q9UQQ2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH2B3Q9UQQ2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH2B3Q9UQQ2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.51■■□□□ 1.03
SH2B3Q9UQQ2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 AC099791.2-201ENST00000605725 427 ntBASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 AC133561.1-201ENST00000568600 2415 ntBASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH2B3Q9UQQ2 FP325331.1-202ENST00000623531 1380 ntBASIC21.49■■□□□ 1.03
SH2B3Q9UQQ2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.49■■□□□ 1.03
SH2B3Q9UQQ2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SH2B3Q9UQQ2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SH2B3Q9UQQ2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.49■■□□□ 1.03
SH2B3Q9UQQ2 DUX4L4-201ENST00000566884 1269 ntBASIC21.49■■□□□ 1.03
SH2B3Q9UQQ2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH2B3Q9UQQ2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
SH2B3Q9UQQ2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.49■■□□□ 1.03
SH2B3Q9UQQ2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH2B3Q9UQQ2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH2B3Q9UQQ2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH2B3Q9UQQ2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
SH2B3Q9UQQ2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms