Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LHX6Q9UPM6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LHX6Q9UPM6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LHX6Q9UPM6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LHX6Q9UPM6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LHX6Q9UPM6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.09■□□□□ 0.97
LHX6Q9UPM6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
LHX6Q9UPM6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.09■□□□□ 0.97
LHX6Q9UPM6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.09■□□□□ 0.97
LHX6Q9UPM6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.09■□□□□ 0.97
LHX6Q9UPM6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
LHX6Q9UPM6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.09■□□□□ 0.97
LHX6Q9UPM6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LHX6Q9UPM6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LHX6Q9UPM6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LHX6Q9UPM6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.08■□□□□ 0.97
LHX6Q9UPM6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LHX6Q9UPM6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
LHX6Q9UPM6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LHX6Q9UPM6 AC010501.1-201ENST00000606270 1962 ntBASIC21.07■□□□□ 0.96
LHX6Q9UPM6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LHX6Q9UPM6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LHX6Q9UPM6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.07■□□□□ 0.96
LHX6Q9UPM6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LHX6Q9UPM6 pRNA.6-201ENST00000610482 90 ntBASIC21.07■□□□□ 0.96
LHX6Q9UPM6 pRNA.5-201ENST00000612139 90 ntBASIC21.07■□□□□ 0.96
LHX6Q9UPM6 pRNA.11-201ENST00000618423 90 ntBASIC21.07■□□□□ 0.96
LHX6Q9UPM6 pRNA.13-201ENST00000619112 90 ntBASIC21.07■□□□□ 0.96
LHX6Q9UPM6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LHX6Q9UPM6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.07■□□□□ 0.96
LHX6Q9UPM6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LHX6Q9UPM6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LHX6Q9UPM6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.07■□□□□ 0.96
LHX6Q9UPM6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LHX6Q9UPM6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.06■□□□□ 0.96
LHX6Q9UPM6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.06■□□□□ 0.96
LHX6Q9UPM6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LHX6Q9UPM6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LHX6Q9UPM6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
LHX6Q9UPM6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.06■□□□□ 0.96
LHX6Q9UPM6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LHX6Q9UPM6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.05■□□□□ 0.96
LHX6Q9UPM6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.05■□□□□ 0.96
LHX6Q9UPM6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.05■□□□□ 0.96
LHX6Q9UPM6 AP004607.4-201ENST00000530158 1459 ntBASIC21.05■□□□□ 0.96
LHX6Q9UPM6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LHX6Q9UPM6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LHX6Q9UPM6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.04■□□□□ 0.96
LHX6Q9UPM6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.04■□□□□ 0.96
LHX6Q9UPM6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LHX6Q9UPM6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LHX6Q9UPM6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LHX6Q9UPM6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LHX6Q9UPM6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LHX6Q9UPM6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.04■□□□□ 0.96
LHX6Q9UPM6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.04■□□□□ 0.96
LHX6Q9UPM6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LHX6Q9UPM6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.04■□□□□ 0.96
LHX6Q9UPM6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.04■□□□□ 0.96
LHX6Q9UPM6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LHX6Q9UPM6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX6Q9UPM6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.04■□□□□ 0.96
LHX6Q9UPM6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
LHX6Q9UPM6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX6Q9UPM6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX6Q9UPM6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.03■□□□□ 0.96
LHX6Q9UPM6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
LHX6Q9UPM6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.03■□□□□ 0.96
LHX6Q9UPM6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.03■□□□□ 0.96
LHX6Q9UPM6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.03■□□□□ 0.96
LHX6Q9UPM6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX6Q9UPM6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LHX6Q9UPM6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LHX6Q9UPM6 KRT18P29-201ENST00000397031 1267 ntBASIC21.02■□□□□ 0.96
LHX6Q9UPM6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.02■□□□□ 0.96
LHX6Q9UPM6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LHX6Q9UPM6 AL121832.2-201ENST00000610979 668 ntBASIC21.02■□□□□ 0.96
LHX6Q9UPM6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.02■□□□□ 0.96
LHX6Q9UPM6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LHX6Q9UPM6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LHX6Q9UPM6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21■□□□□ 0.95
LHX6Q9UPM6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms