Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 AC009086.3-201ENST00000623486 1008 ntBASIC25.64■■□□□ 1.7
PCDHA6Q9UN73 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHA6Q9UN73 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.64■■□□□ 1.69
PCDHA6Q9UN73 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHA6Q9UN73 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA6Q9UN73 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA6Q9UN73 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA6Q9UN73 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA6Q9UN73 AC024257.2-201ENST00000549699 147 ntBASIC25.63■■□□□ 1.69
PCDHA6Q9UN73 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
PCDHA6Q9UN73 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.63■■□□□ 1.69
PCDHA6Q9UN73 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHA6Q9UN73 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA6Q9UN73 AL353803.4-201ENST00000565882 1934 ntBASIC25.63■■□□□ 1.69
PCDHA6Q9UN73 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA6Q9UN73 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHA6Q9UN73 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA6Q9UN73 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.62■■□□□ 1.69
PCDHA6Q9UN73 FP325331.1-202ENST00000623531 1380 ntBASIC25.62■■□□□ 1.69
PCDHA6Q9UN73 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.62■■□□□ 1.69
PCDHA6Q9UN73 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.62■■□□□ 1.69
PCDHA6Q9UN73 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA6Q9UN73 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA6Q9UN73 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.62■■□□□ 1.69
PCDHA6Q9UN73 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA6Q9UN73 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA6Q9UN73 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.62■■□□□ 1.69
PCDHA6Q9UN73 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDHA6Q9UN73 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.61■■□□□ 1.69
PCDHA6Q9UN73 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA6Q9UN73 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
PCDHA6Q9UN73 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.61■■□□□ 1.69
PCDHA6Q9UN73 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.61■■□□□ 1.69
PCDHA6Q9UN73 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
PCDHA6Q9UN73 AC135279.3-201ENST00000610945 1311 ntBASIC25.61■■□□□ 1.69
PCDHA6Q9UN73 DUSP8P5-201ENST00000422884 1815 ntBASIC25.6■■□□□ 1.69
PCDHA6Q9UN73 DUSP8P3-201ENST00000399571 1760 ntBASIC25.6■■□□□ 1.69
PCDHA6Q9UN73 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.6■■□□□ 1.69
PCDHA6Q9UN73 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.6■■□□□ 1.69
PCDHA6Q9UN73 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.6■■□□□ 1.69
PCDHA6Q9UN73 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA6Q9UN73 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA6Q9UN73 LINC01529-204ENST00000636474 1715 ntBASIC25.6■■□□□ 1.69
PCDHA6Q9UN73 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
PCDHA6Q9UN73 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA6Q9UN73 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA6Q9UN73 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA6Q9UN73 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA6Q9UN73 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA6Q9UN73 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA6Q9UN73 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.59■■□□□ 1.69
PCDHA6Q9UN73 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.59■■□□□ 1.69
PCDHA6Q9UN73 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.59■■□□□ 1.69
PCDHA6Q9UN73 AC133561.4-201ENST00000566112 224 ntBASIC25.59■■□□□ 1.69
PCDHA6Q9UN73 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA6Q9UN73 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA6Q9UN73 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDHA6Q9UN73 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA6Q9UN73 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA6Q9UN73 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA6Q9UN73 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.58■■□□□ 1.69
PCDHA6Q9UN73 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA6Q9UN73 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA6Q9UN73 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.58■■□□□ 1.69
PCDHA6Q9UN73 DUX4L4-201ENST00000566884 1269 ntBASIC25.58■■□□□ 1.69
PCDHA6Q9UN73 MIR3181-201ENST00000578512 73 ntBASIC25.58■■□□□ 1.69
PCDHA6Q9UN73 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
PCDHA6Q9UN73 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.57■■□□□ 1.68
PCDHA6Q9UN73 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA6Q9UN73 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA6Q9UN73 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
PCDHA6Q9UN73 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA6Q9UN73 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA6Q9UN73 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA6Q9UN73 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.57■■□□□ 1.68
PCDHA6Q9UN73 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.57■■□□□ 1.68
PCDHA6Q9UN73 AC005837.3-201ENST00000612163 286 ntBASIC25.57■■□□□ 1.68
PCDHA6Q9UN73 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA6Q9UN73 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.57■■□□□ 1.68
PCDHA6Q9UN73 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHA6Q9UN73 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHA6Q9UN73 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
PCDHA6Q9UN73 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHA6Q9UN73 AL138724.1-201ENST00000606771 1088 ntBASIC25.56■■□□□ 1.68
PCDHA6Q9UN73 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHA6Q9UN73 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.56■■□□□ 1.68
PCDHA6Q9UN73 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.56■■□□□ 1.68
PCDHA6Q9UN73 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.56■■□□□ 1.68
PCDHA6Q9UN73 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDHA6Q9UN73 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA6Q9UN73 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA6Q9UN73 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDHA6Q9UN73 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA6Q9UN73 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDHA6Q9UN73 pRNA.6-201ENST00000610482 90 ntBASIC25.55■■□□□ 1.68
PCDHA6Q9UN73 pRNA.5-201ENST00000612139 90 ntBASIC25.55■■□□□ 1.68
PCDHA6Q9UN73 pRNA.11-201ENST00000618423 90 ntBASIC25.55■■□□□ 1.68
PCDHA6Q9UN73 pRNA.13-201ENST00000619112 90 ntBASIC25.55■■□□□ 1.68
PCDHA6Q9UN73 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA6Q9UN73 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms