Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DUX4Q9UBX2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.41■□□□□ 0.7
DUX4Q9UBX2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DUX4Q9UBX2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DUX4Q9UBX2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
DUX4Q9UBX2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.41■□□□□ 0.7
DUX4Q9UBX2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DUX4Q9UBX2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DUX4Q9UBX2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
DUX4Q9UBX2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
DUX4Q9UBX2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DUX4Q9UBX2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DUX4Q9UBX2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DUX4Q9UBX2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
DUX4Q9UBX2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DUX4Q9UBX2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DUX4Q9UBX2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.4■□□□□ 0.7
DUX4Q9UBX2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.4■□□□□ 0.7
DUX4Q9UBX2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.4■□□□□ 0.7
DUX4Q9UBX2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DUX4Q9UBX2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DUX4Q9UBX2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.39■□□□□ 0.69
DUX4Q9UBX2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DUX4Q9UBX2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DUX4Q9UBX2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DUX4Q9UBX2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.39■□□□□ 0.69
DUX4Q9UBX2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.39■□□□□ 0.69
DUX4Q9UBX2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.39■□□□□ 0.69
DUX4Q9UBX2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DUX4Q9UBX2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.39■□□□□ 0.69
DUX4Q9UBX2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DUX4Q9UBX2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DUX4Q9UBX2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DUX4Q9UBX2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DUX4Q9UBX2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DUX4Q9UBX2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
DUX4Q9UBX2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DUX4Q9UBX2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.38■□□□□ 0.69
DUX4Q9UBX2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.38■□□□□ 0.69
DUX4Q9UBX2 AC137767.1-201ENST00000602918 1920 ntBASIC19.38■□□□□ 0.69
DUX4Q9UBX2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
DUX4Q9UBX2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
DUX4Q9UBX2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
DUX4Q9UBX2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DUX4Q9UBX2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DUX4Q9UBX2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DUX4Q9UBX2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DUX4Q9UBX2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DUX4Q9UBX2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DUX4Q9UBX2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
DUX4Q9UBX2 AF131216.4-201ENST00000638924 1588 ntBASIC19.37■□□□□ 0.69
DUX4Q9UBX2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
DUX4Q9UBX2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
DUX4Q9UBX2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.37■□□□□ 0.69
DUX4Q9UBX2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
DUX4Q9UBX2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DUX4Q9UBX2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.37■□□□□ 0.69
DUX4Q9UBX2 AL035685.1-201ENST00000636663 812 ntBASIC19.37■□□□□ 0.69
DUX4Q9UBX2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.37■□□□□ 0.69
DUX4Q9UBX2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DUX4Q9UBX2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.37■□□□□ 0.69
DUX4Q9UBX2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DUX4Q9UBX2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DUX4Q9UBX2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DUX4Q9UBX2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.35■□□□□ 0.69
DUX4Q9UBX2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DUX4Q9UBX2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.35■□□□□ 0.69
DUX4Q9UBX2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DUX4Q9UBX2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DUX4Q9UBX2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DUX4Q9UBX2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DUX4Q9UBX2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
DUX4Q9UBX2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.35■□□□□ 0.69
DUX4Q9UBX2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DUX4Q9UBX2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
DUX4Q9UBX2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DUX4Q9UBX2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DUX4Q9UBX2 C1orf229-201ENST00000623686 2258 ntBASIC19.35■□□□□ 0.69
DUX4Q9UBX2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
DUX4Q9UBX2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
DUX4Q9UBX2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DUX4Q9UBX2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DUX4Q9UBX2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
DUX4Q9UBX2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms