Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COMMD3Q9UBI1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3Q9UBI1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3Q9UBI1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
COMMD3Q9UBI1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.59■□□□□ 0.73
COMMD3Q9UBI1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3Q9UBI1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3Q9UBI1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3Q9UBI1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COMMD3Q9UBI1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.58■□□□□ 0.73
COMMD3Q9UBI1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.58■□□□□ 0.73
COMMD3Q9UBI1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
COMMD3Q9UBI1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.58■□□□□ 0.72
COMMD3Q9UBI1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COMMD3Q9UBI1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
COMMD3Q9UBI1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
COMMD3Q9UBI1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COMMD3Q9UBI1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
COMMD3Q9UBI1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.58■□□□□ 0.72
COMMD3Q9UBI1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
COMMD3Q9UBI1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
COMMD3Q9UBI1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
COMMD3Q9UBI1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
COMMD3Q9UBI1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COMMD3Q9UBI1 AC026310.3-201ENST00000625186 2373 ntBASIC19.57■□□□□ 0.72
COMMD3Q9UBI1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
COMMD3Q9UBI1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COMMD3Q9UBI1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.57■□□□□ 0.72
COMMD3Q9UBI1 RP9P-202ENST00000450133 1212 ntBASIC19.57■□□□□ 0.72
COMMD3Q9UBI1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.57■□□□□ 0.72
COMMD3Q9UBI1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.57■□□□□ 0.72
COMMD3Q9UBI1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COMMD3Q9UBI1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COMMD3Q9UBI1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COMMD3Q9UBI1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COMMD3Q9UBI1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COMMD3Q9UBI1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.56■□□□□ 0.72
COMMD3Q9UBI1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.56■□□□□ 0.72
COMMD3Q9UBI1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3Q9UBI1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3Q9UBI1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3Q9UBI1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.56■□□□□ 0.72
COMMD3Q9UBI1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3Q9UBI1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
COMMD3Q9UBI1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 AC090877.2-201ENST00000558441 1738 ntBASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.55■□□□□ 0.72
COMMD3Q9UBI1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COMMD3Q9UBI1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.54■□□□□ 0.72
COMMD3Q9UBI1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3Q9UBI1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3Q9UBI1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3Q9UBI1 AC093536.1-201ENST00000569153 554 ntBASIC19.54■□□□□ 0.72
COMMD3Q9UBI1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3Q9UBI1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3Q9UBI1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3Q9UBI1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3Q9UBI1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3Q9UBI1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
COMMD3Q9UBI1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 AC060814.1-201ENST00000554326 538 ntBASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 AC079630.1-202ENST00000618127 1840 ntBASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
COMMD3Q9UBI1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.52■□□□□ 0.72
COMMD3Q9UBI1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD3Q9UBI1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.52■□□□□ 0.72
COMMD3Q9UBI1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD3Q9UBI1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD3Q9UBI1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms