Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NLGN3Q9NZ94 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.84■■□□□ 1.09
NLGN3Q9NZ94 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NLGN3Q9NZ94 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NLGN3Q9NZ94 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.84■■□□□ 1.09
NLGN3Q9NZ94 FP325331.1-202ENST00000623531 1380 ntBASIC21.84■■□□□ 1.09
NLGN3Q9NZ94 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NLGN3Q9NZ94 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
NLGN3Q9NZ94 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NLGN3Q9NZ94 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
NLGN3Q9NZ94 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
NLGN3Q9NZ94 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.83■■□□□ 1.09
NLGN3Q9NZ94 MIR572-201ENST00000384983 95 ntBASIC21.83■■□□□ 1.09
NLGN3Q9NZ94 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.83■■□□□ 1.09
NLGN3Q9NZ94 AC027612.3-201ENST00000413684 1047 ntBASIC21.83■■□□□ 1.09
NLGN3Q9NZ94 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NLGN3Q9NZ94 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NLGN3Q9NZ94 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
NLGN3Q9NZ94 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
NLGN3Q9NZ94 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
NLGN3Q9NZ94 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NLGN3Q9NZ94 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NLGN3Q9NZ94 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
NLGN3Q9NZ94 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NLGN3Q9NZ94 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NLGN3Q9NZ94 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.82■■□□□ 1.08
NLGN3Q9NZ94 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.82■■□□□ 1.08
NLGN3Q9NZ94 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.82■■□□□ 1.08
NLGN3Q9NZ94 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
NLGN3Q9NZ94 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.82■■□□□ 1.08
NLGN3Q9NZ94 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
NLGN3Q9NZ94 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NLGN3Q9NZ94 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NLGN3Q9NZ94 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.81■■□□□ 1.08
NLGN3Q9NZ94 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NLGN3Q9NZ94 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NLGN3Q9NZ94 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
NLGN3Q9NZ94 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NLGN3Q9NZ94 AC123595.1-201ENST00000440769 1046 ntBASIC21.81■■□□□ 1.08
NLGN3Q9NZ94 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.81■■□□□ 1.08
NLGN3Q9NZ94 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.81■■□□□ 1.08
NLGN3Q9NZ94 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NLGN3Q9NZ94 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.81■■□□□ 1.08
NLGN3Q9NZ94 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NLGN3Q9NZ94 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NLGN3Q9NZ94 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.81■■□□□ 1.08
NLGN3Q9NZ94 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.81■■□□□ 1.08
NLGN3Q9NZ94 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 DUX4L4-201ENST00000566884 1269 ntBASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 AL354811.1-201ENST00000610286 706 ntBASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 AL031602.1-201ENST00000633169 911 ntBASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.8■■□□□ 1.08
NLGN3Q9NZ94 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
NLGN3Q9NZ94 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NLGN3Q9NZ94 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NLGN3Q9NZ94 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NLGN3Q9NZ94 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NLGN3Q9NZ94 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NLGN3Q9NZ94 OR2I1P-207ENST00000453522 948 ntBASIC21.79■■□□□ 1.08
NLGN3Q9NZ94 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.79■■□□□ 1.08
NLGN3Q9NZ94 AC012414.1-201ENST00000556676 535 ntBASIC21.79■■□□□ 1.08
NLGN3Q9NZ94 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.79■■□□□ 1.08
NLGN3Q9NZ94 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
NLGN3Q9NZ94 AL139125.2-201ENST00000623134 1869 ntBASIC21.79■■□□□ 1.08
NLGN3Q9NZ94 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.79■■□□□ 1.08
NLGN3Q9NZ94 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NLGN3Q9NZ94 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
NLGN3Q9NZ94 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NLGN3Q9NZ94 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NLGN3Q9NZ94 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
NLGN3Q9NZ94 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NLGN3Q9NZ94 KRT18P5-201ENST00000436075 1291 ntBASIC21.78■■□□□ 1.08
NLGN3Q9NZ94 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NLGN3Q9NZ94 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.78■■□□□ 1.08
NLGN3Q9NZ94 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
NLGN3Q9NZ94 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NLGN3Q9NZ94 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NLGN3Q9NZ94 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms