Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.06■■□□□ 1.6
RNF216Q9NWF9 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC25.06■■□□□ 1.6
RNF216Q9NWF9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.06■■□□□ 1.6
RNF216Q9NWF9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
RNF216Q9NWF9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.05■■□□□ 1.6
RNF216Q9NWF9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.05■■□□□ 1.6
RNF216Q9NWF9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF216Q9NWF9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
RNF216Q9NWF9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF216Q9NWF9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF216Q9NWF9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RNF216Q9NWF9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF216Q9NWF9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF216Q9NWF9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF216Q9NWF9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 SUDS3P1-201ENST00000505831 966 ntBASIC25.04■■□□□ 1.6
RNF216Q9NWF9 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 AC012676.1-201ENST00000574705 1949 ntBASIC25.04■■□□□ 1.6
RNF216Q9NWF9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
RNF216Q9NWF9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF216Q9NWF9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF216Q9NWF9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF216Q9NWF9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF216Q9NWF9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.03■■□□□ 1.6
RNF216Q9NWF9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF216Q9NWF9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.03■■□□□ 1.6
RNF216Q9NWF9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF216Q9NWF9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RNF216Q9NWF9 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.03■■□□□ 1.6
RNF216Q9NWF9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.03■■□□□ 1.6
RNF216Q9NWF9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
RNF216Q9NWF9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF216Q9NWF9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RNF216Q9NWF9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF216Q9NWF9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF216Q9NWF9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF216Q9NWF9 AC024257.2-201ENST00000549699 147 ntBASIC25.02■■□□□ 1.6
RNF216Q9NWF9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
RNF216Q9NWF9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF216Q9NWF9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.02■■□□□ 1.6
RNF216Q9NWF9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF216Q9NWF9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
RNF216Q9NWF9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
RNF216Q9NWF9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.01■■□□□ 1.59
RNF216Q9NWF9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
RNF216Q9NWF9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
RNF216Q9NWF9 AC005972.3-201ENST00000606304 481 ntBASIC25.01■■□□□ 1.59
RNF216Q9NWF9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
RNF216Q9NWF9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF216Q9NWF9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RNF216Q9NWF9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF216Q9NWF9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF216Q9NWF9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
RNF216Q9NWF9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF216Q9NWF9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.01■■□□□ 1.59
RNF216Q9NWF9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.01■■□□□ 1.59
RNF216Q9NWF9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF216Q9NWF9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25■■□□□ 1.59
RNF216Q9NWF9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
RNF216Q9NWF9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
RNF216Q9NWF9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF216Q9NWF9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
RNF216Q9NWF9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF216Q9NWF9 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC25■■□□□ 1.59
RNF216Q9NWF9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF216Q9NWF9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF216Q9NWF9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF216Q9NWF9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25■■□□□ 1.59
RNF216Q9NWF9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25■■□□□ 1.59
RNF216Q9NWF9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF216Q9NWF9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
RNF216Q9NWF9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF216Q9NWF9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RNF216Q9NWF9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
RNF216Q9NWF9 HSFY1P1-201ENST00000423928 1178 ntBASIC24.99■■□□□ 1.59
RNF216Q9NWF9 AL022069.1-201ENST00000568025 1636 ntBASIC24.99■■□□□ 1.59
RNF216Q9NWF9 AL031432.3-201ENST00000607698 485 ntBASIC24.99■■□□□ 1.59
RNF216Q9NWF9 SYT6-210ENST00000641643 1587 ntBASIC24.99■■□□□ 1.59
RNF216Q9NWF9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RNF216Q9NWF9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RNF216Q9NWF9 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC24.98■■□□□ 1.59
RNF216Q9NWF9 AC022494.1-201ENST00000466044 728 ntBASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms