Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
C12orf4Q9NQ89 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
C12orf4Q9NQ89 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
C12orf4Q9NQ89 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 AC007375.3-201ENST00000600936 2314 ntBASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
C12orf4Q9NQ89 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.21■□□□□ 0.67
C12orf4Q9NQ89 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C12orf4Q9NQ89 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C12orf4Q9NQ89 AC092068.2-201ENST00000590491 1708 ntBASIC19.2■□□□□ 0.66
C12orf4Q9NQ89 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
C12orf4Q9NQ89 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C12orf4Q9NQ89 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.2■□□□□ 0.66
C12orf4Q9NQ89 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
C12orf4Q9NQ89 DUX4L9-201ENST00000449051 1259 ntBASIC19.2■□□□□ 0.66
C12orf4Q9NQ89 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
C12orf4Q9NQ89 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C12orf4Q9NQ89 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C12orf4Q9NQ89 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.2■□□□□ 0.66
C12orf4Q9NQ89 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.2■□□□□ 0.66
C12orf4Q9NQ89 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 AL022069.1-201ENST00000568025 1636 ntBASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.19■□□□□ 0.66
C12orf4Q9NQ89 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.18■□□□□ 0.66
C12orf4Q9NQ89 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C12orf4Q9NQ89 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C12orf4Q9NQ89 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
C12orf4Q9NQ89 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C12orf4Q9NQ89 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C12orf4Q9NQ89 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
C12orf4Q9NQ89 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C12orf4Q9NQ89 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.18■□□□□ 0.66
C12orf4Q9NQ89 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
C12orf4Q9NQ89 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
C12orf4Q9NQ89 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
C12orf4Q9NQ89 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
C12orf4Q9NQ89 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C12orf4Q9NQ89 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C12orf4Q9NQ89 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
C12orf4Q9NQ89 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C12orf4Q9NQ89 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C12orf4Q9NQ89 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C12orf4Q9NQ89 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
C12orf4Q9NQ89 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C12orf4Q9NQ89 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C12orf4Q9NQ89 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C12orf4Q9NQ89 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C12orf4Q9NQ89 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C12orf4Q9NQ89 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.16■□□□□ 0.66
C12orf4Q9NQ89 AC011551.1-201ENST00000614101 683 ntBASIC19.16■□□□□ 0.66
C12orf4Q9NQ89 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C12orf4Q9NQ89 DUSP8P3-201ENST00000399571 1760 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms